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Protein–RNA interactions for Protein: O75056
SDC3, Syndecan-3, human
Predictions only
Length
442 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SDC3
O75056
Y_RNA.404-201
ENST00000383978
102 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
RNU6-331P-201
ENST00000384724
107 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
MIR329-1-201
ENST00000385028
80 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
RNU6-876P-201
ENST00000391295
104 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
TOMM22P2-201
ENST00000430735
237 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
AC073910.1-201
ENST00000445047
438 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
LINC01032-201
ENST00000451690
276 nt
TSL 5
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
snoU13.27-201
ENST00000459278
104 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
RPL31P58-201
ENST00000469001
379 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
RPL7P42-201
ENST00000481005
679 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
SRP72-202
ENST00000504757
745 nt
TSL 2
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
RNU6-902P-201
ENST00000517212
91 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
AC125232.2-201
ENST00000592457
143 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
MIR6078-201
ENST00000611069
100 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
AL359075.3-201
ENST00000613288
217 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
WT1-AS_8.1-201
ENST00000615200
275 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
SPTSSB-205
ENST00000620149
231 nt
APPRIS P1
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
AC095038.3-201
ENST00000634439
195 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
MTND5P10-201
ENST00000603719
1809 nt
BASIC
1.36
□□□□□ -2.19
SDC3
O75056
AL161722.3-201
ENST00000605789
2983 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
RNU6-874P-201
ENST00000362390
105 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
RNU6-1266P-201
ENST00000362794
105 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
SNORA75.4-201
ENST00000391278
119 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
COX6CP10-201
ENST00000416832
224 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AL513185.1-201
ENST00000431638
162 nt
TSL 5
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AL135790.2-201
ENST00000437701
267 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
UBE2V1P7-201
ENST00000446395
340 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AC245517.4-201
ENST00000448601
281 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
RNU1-123P-201
ENST00000458950
160 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AL163195.1-201
ENST00000496941
348 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AC103851.1-201
ENST00000506833
274 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
RNU1-142P-201
ENST00000516682
145 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AC019176.1-201
ENST00000518519
225 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AC091144.1-201
ENST00000519573
138 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
IGLVVI-22-1-201
ENST00000521183
211 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
FRG2DP-202
ENST00000566967
323 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
PISRT1.1-201
ENST00000616930
107 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AC138058.1-201
ENST00000620572
449 nt
TSL 3
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AL121890.5-201
ENST00000620848
304 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
AC006435.5-201
ENST00000624486
112 nt
BASIC
1.35
□□□□□ -2.19
SDC3
O75056
SNORD33-201
ENST00000362761
85 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
Y_RNA.116-201
ENST00000363292
103 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
Y_RNA.122-201
ENST00000363331
96 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
SNORD81.2-201
ENST00000365153
76 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
RNU6-1145P-201
ENST00000384246
107 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
MIR194-1-201
ENST00000384892
85 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
RNA5SP323-201
ENST00000391094
133 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
RNU6-1001P-201
ENST00000411265
100 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
RBMX2P4-201
ENST00000441256
376 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
RPS27P1-201
ENST00000450552
247 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
AC022445.1-201
ENST00000457499
408 nt
TSL 3
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
ATP1B3-AS1-201
ENST00000492725
376 nt
TSL 5
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
RNA5SP102-201
ENST00000516865
106 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
AL137100.2-201
ENST00000555786
315 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
AL160236.1-201
ENST00000556317
195 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
AC092138.2-201
ENST00000563811
428 nt
TSL 5
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
MIR3937-201
ENST00000580135
106 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
MIR7974-201
ENST00000615835
79 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
U6.73-201
ENST00000619194
103 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
TPTEP1-208
ENST00000636884
213 nt
BASIC
1.34
□□□□□ -2.19
SDC3
O75056
AP000648.3-201
ENST00000623539
4507 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
U8.1-201
ENST00000362843
134 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
RNU6-950P-201
ENST00000384651
107 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
Y_RNA.557-201
ENST00000384680
107 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
MIR320A-201
ENST00000385302
82 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
AL353997.1-201
ENST00000432936
108 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
Y_RNA.635-201
ENST00000459041
101 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
RPL17P19-201
ENST00000489069
552 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
HMGN1P12-201
ENST00000499125
195 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
AC074133.1-201
ENST00000515696
183 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
SCARNA16.2-201
ENST00000516520
172 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
RNU7-128P-201
ENST00000517247
62 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
AC016885.2-201
ENST00000522598
261 nt
TSL 3
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
APOOP3-201
ENST00000536787
586 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
hsa-mir-3119-1.1-201
ENST00000577602
85 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
MIR3684-201
ENST00000579779
74 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
PRR13P7-201
ENST00000605538
430 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
MIR6504-201
ENST00000613520
61 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
AC092794.2-201
ENST00000620933
563 nt
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
SKIL-204
ENST00000458537
7182 nt
APPRIS P1
TSL 1 (best)
BASIC
1.33
□□□□□ -2.2
SDC3
O75056
MIR410-201
ENST00000362222
80 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
SNORA4.2-201
ENST00000365313
147 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
RNU6-1264P-201
ENST00000383891
107 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
RNU6-203P-201
ENST00000384038
104 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
MRPL35P1-201
ENST00000404272
572 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
RNU4-14P-201
ENST00000410858
122 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
AC008080.3-201
ENST00000440074
380 nt
TSL 3
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
SNORD65B-201
ENST00000459126
73 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
CFLAR-AS1-202
ENST00000474886
223 nt
TSL 3
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
AC010598.1-201
ENST00000510378
103 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
RNU7-99P-201
ENST00000516271
62 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
RN7SKP49-201
ENST00000516675
260 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
SNORA20.3-201
ENST00000516880
132 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
AC009930.1-201
ENST00000522330
191 nt
TSL 5
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
AC004584.2-201
ENST00000570407
410 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
MIR4709-201
ENST00000577272
72 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
AC015688.6-201
ENST00000577737
104 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
CENPF-206
ENST00000614578
528 nt
TSL 5
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
AL669831.3-213
ENST00000636676
183 nt
BASIC
1.32
□□□□□ -2.2
SDC3
O75056
AC099654.14-201
ENST00000638599
341 nt
BASIC
1.32
□□□□□ -2.2
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Retrieved 100 of 98,524 protein–RNA pairs in 178 ms