Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 SNORA72.1-201ENST00000363485 129 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 MTCYBP4-201ENST00000401524 249 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 RN7SKP51-201ENST00000410781 304 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.56□□□□□ -2.16
PLOD3O60568 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.56□□□□□ -2.16
PLOD3O60568 AC027419.1-201ENST00000522976 328 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 RAB11AP2-201ENST00000545905 639 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.56□□□□□ -2.16
PLOD3O60568 RPL21P9-201ENST00000556149 474 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.56□□□□□ -2.16
PLOD3O60568 MIR3683-201ENST00000580847 82 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 AC022217.4-201ENST00000604389 163 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 AC021506.2-201ENST00000612354 169 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 AL669831.3-213ENST00000636676 183 ntBASIC1.56□□□□□ -2.16
PLOD3O60568 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
PLOD3O60568 RNU6-440P-201ENST00000390882 105 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 RPL30P13-201ENST00000418873 348 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 AL606517.2-201ENST00000442855 241 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.55□□□□□ -2.16
PLOD3O60568 RPL30P7-201ENST00000479312 323 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 AC010469.2-201ENST00000496412 480 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.55□□□□□ -2.16
PLOD3O60568 AC015712.3-201ENST00000559380 164 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 MIR5701-3-201ENST00000578890 82 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 MIR4801-201ENST00000582704 82 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 MIR5701-1-201ENST00000585138 82 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 AL365434.2-201ENST00000607979 234 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 MIR5701-2-201ENST00000615634 82 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 AC092794.2-201ENST00000620933 563 ntBASIC1.55□□□□□ -2.16
PLOD3O60568 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
PLOD3O60568 Y_RNA.142-201ENST00000363491 102 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 AL627390.1-201ENST00000396055 340 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 MRPS10P1-201ENST00000448483 130 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 RNU6-120P-201ENST00000516077 103 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 RNU6-559P-201ENST00000516151 98 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 Y_RNA.691-201ENST00000516611 103 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 SUMO2P16-201ENST00000519475 264 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 AC105029.1-201ENST00000520250 669 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 SNORA28-201ENST00000606769 126 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 MIR8065-201ENST00000620577 100 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 AC006026.1-201ENST00000444025 1803 ntBASIC1.54□□□□□ -2.16
PLOD3O60568 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PLOD3O60568 MIR26B-201ENST00000362251 77 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 RNU6-879P-201ENST00000364328 108 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 RNU6-1264P-201ENST00000383891 107 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 RNU6-1001P-201ENST00000411265 100 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 EIF1P2-201ENST00000428233 350 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 RPL30P15-201ENST00000457129 321 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 AC108210.2-201ENST00000503681 201 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.53□□□□□ -2.16
PLOD3O60568 SNORA31.10-201ENST00000516482 106 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 AC023157.2-201ENST00000540596 141 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.53□□□□□ -2.16
PLOD3O60568 MIR5690-201ENST00000583739 73 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 MIR8081-201ENST00000611533 95 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 AL021879.1-201ENST00000611756 288 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 MIR1244-1-201ENST00000612829 85 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 AC104260.1-201ENST00000616660 539 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 MIR1244-3-201ENST00000635744 85 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 MIR1244-2-201ENST00000636449 85 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 MIR1244-4-202ENST00000636813 85 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.53□□□□□ -2.16
PLOD3O60568 AC018630.2-201ENST00000534866 2403 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 RNU6-99P-201ENST00000364721 107 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 Y_RNA.303-201ENST00000364998 94 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 Y_RNA.358-201ENST00000365491 99 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 Y_RNA.498-201ENST00000384460 102 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 MIR562-201ENST00000384894 95 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 Y_RNA.646-201ENST00000410980 101 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 MTCO3P19-201ENST00000415864 321 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.52□□□□□ -2.17
PLOD3O60568 AC074133.1-201ENST00000515696 183 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 SNORA25.15-201ENST00000516487 89 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 RNU6-264P-201ENST00000517134 104 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 RNU7-128P-201ENST00000517247 62 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 AC022868.1-201ENST00000517767 391 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.52□□□□□ -2.17
PLOD3O60568 UBE2V2P2-201ENST00000587677 504 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 AC113139.1-201ENST00000605049 239 ntBASIC1.52□□□□□ -2.17
PLOD3O60568 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.52□□□□□ -2.17
PLOD3O60568 MIR329-1-201ENST00000385028 80 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 CYCSP49-201ENST00000420810 319 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.51□□□□□ -2.17
PLOD3O60568 PCNPP5-201ENST00000452246 481 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 RPL17P19-201ENST00000489069 552 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 AL512310.8-201ENST00000550183 120 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 CYP3A52P-201ENST00000563326 91 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 MIR548S-201ENST00000581352 82 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 MTND4LP32-201ENST00000636111 270 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 AC073544.1-201ENST00000600110 1595 ntBASIC1.51□□□□□ -2.17
PLOD3O60568 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
PLOD3O60568 RNU6-874P-201ENST00000362390 105 ntBASIC1.5□□□□□ -2.17
PLOD3O60568 RNU6-1188P-201ENST00000363795 107 ntBASIC1.5□□□□□ -2.17
PLOD3O60568 SNORA25.8-201ENST00000364831 128 ntBASIC1.5□□□□□ -2.17
PLOD3O60568 RNU6-310P-201ENST00000384655 107 ntBASIC1.5□□□□□ -2.17
PLOD3O60568 RNA5SP213-201ENST00000391031 106 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms