Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.32□□□□□ -2.2
SLC28A1O00337 AL645939.4-201ENST00000604495 135 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 AL365434.2-201ENST00000607979 234 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 AC092794.2-201ENST00000620933 563 ntBASIC1.32□□□□□ -2.2
SLC28A1O00337 RNU6-845P-201ENST00000362578 103 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 RNA5SP361-201ENST00000362686 118 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 Y_RNA.279-201ENST00000364763 95 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 RNU6-1145P-201ENST00000384246 107 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 Y_RNA.505-201ENST00000384489 102 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 SNORA75.4-201ENST00000391278 119 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 AL034345.1-201ENST00000407768 123 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 ELOCP21-201ENST00000412558 336 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
SLC28A1O00337 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.31□□□□□ -2.2
SLC28A1O00337 RPL31P58-201ENST00000469001 379 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 RPL17P19-201ENST00000489069 552 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.31□□□□□ -2.2
SLC28A1O00337 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.31□□□□□ -2.2
SLC28A1O00337 AC074133.1-201ENST00000515696 183 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 AC022868.1-201ENST00000517767 391 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 MIR3684-201ENST00000579779 74 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 AL390123.1-201ENST00000603216 237 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 AC073413.2-201ENST00000604332 360 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 PRR13P7-201ENST00000605538 430 ntBASIC1.31□□□□□ -2.2
SLC28A1O00337 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.31□□□□□ -2.2
SLC28A1O00337 AC073544.1-201ENST00000600110 1595 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SLC28A1O00337 Y_RNA.166-201ENST00000363730 102 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 Y_RNA.248-201ENST00000364501 109 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 Y_RNA.358-201ENST00000365491 99 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 RNU11-5P-201ENST00000391216 129 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 RNU6-876P-201ENST00000391295 104 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 MTCYBP4-201ENST00000401524 249 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 PCNPP5-201ENST00000452246 481 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 RN7SKP49-201ENST00000516675 260 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.3□□□□□ -2.2
SLC28A1O00337 SUB1P3-201ENST00000564581 315 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 AL357075.2-201ENST00000614906 189 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 AC018630.2-201ENST00000534866 2403 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 ZNF72P-201ENST00000425869 1908 ntBASIC1.3□□□□□ -2.2
SLC28A1O00337 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 SNORA20B-201ENST00000384220 132 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 MTCO3P19-201ENST00000415864 321 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.29□□□□□ -2.2
SLC28A1O00337 PGBD4P5-201ENST00000445958 426 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 Y_RNA.635-201ENST00000459041 101 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 U8.22-201ENST00000459141 133 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 RPL30P7-201ENST00000479312 323 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 AC097462.1-201ENST00000514125 324 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 SUMO2P16-201ENST00000519475 264 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.29□□□□□ -2.2
SLC28A1O00337 AL162424.1-201ENST00000602325 221 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 AL021879.1-201ENST00000611756 288 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 AL669831.3-213ENST00000636676 183 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.29□□□□□ -2.2
SLC28A1O00337 RNU6-407P-201ENST00000365280 104 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 Y_RNA.498-201ENST00000384460 102 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 MT-TL1-201ENST00000386347 75 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 AL355796.1-201ENST00000406706 323 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 RPL30P13-201ENST00000418873 348 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.28□□□□□ -2.2
SLC28A1O00337 MTND1P2-201ENST00000430604 821 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 AL591806.2-201ENST00000433122 173 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 RNU6-625P-201ENST00000459412 107 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.28□□□□□ -2.2
SLC28A1O00337 Y_RNA.691-201ENST00000516611 103 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 RNU7-172P-201ENST00000517125 64 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 AL512310.8-201ENST00000550183 120 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 AC018448.1-201ENST00000552843 316 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 MIR1244-1-201ENST00000612829 85 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 MIR1244-3-201ENST00000635744 85 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 MIR6079-201ENST00000635807 62 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 MIR1244-2-201ENST00000636449 85 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 MIR1244-4-202ENST00000636813 85 ntBASIC1.28□□□□□ -2.2
SLC28A1O00337 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SLC28A1O00337 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SLC28A1O00337 RNU1-22P-201ENST00000363334 158 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 Y_RNA.599-201ENST00000410489 109 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.27□□□□□ -2.21
SLC28A1O00337 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.27□□□□□ -2.21
SLC28A1O00337 MTND4P17-201ENST00000470444 350 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 RNU6-1213P-201ENST00000517075 94 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.27□□□□□ -2.21
SLC28A1O00337 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.27□□□□□ -2.21
SLC28A1O00337 RAB11AP2-201ENST00000545905 639 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 RPL21P9-201ENST00000556149 474 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 AC008269.2-201ENST00000561915 1105 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 SNORA28-201ENST00000606769 126 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 AL513423.1-201ENST00000621695 132 ntBASIC1.27□□□□□ -2.21
SLC28A1O00337 MIR410-201ENST00000362222 80 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 AC114482.1-201ENST00000418010 247 ntBASIC1.26□□□□□ -2.21
SLC28A1O00337 PDCL2P1-201ENST00000419302 352 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms