Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
DFFAO00273 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.58□□□□□ -2.32
DFFAO00273 MTCO3P19-201ENST00000415864 321 ntBASIC0.58□□□□□ -2.32
DFFAO00273 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
DFFAO00273 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.58□□□□□ -2.32
DFFAO00273 AC092447.3-201ENST00000426027 686 ntBASIC0.58□□□□□ -2.32
DFFAO00273 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.58□□□□□ -2.32
DFFAO00273 AC245047.8-201ENST00000456455 284 ntBASIC0.58□□□□□ -2.32
DFFAO00273 LINC01399-202ENST00000458450 244 ntBASIC0.58□□□□□ -2.32
DFFAO00273 RPL30P10-201ENST00000488148 337 ntBASIC0.58□□□□□ -2.32
DFFAO00273 SNORA70.12-201ENST00000516084 153 ntBASIC0.58□□□□□ -2.32
DFFAO00273 RNU2-56P-201ENST00000516826 190 ntBASIC0.58□□□□□ -2.32
DFFAO00273 Y_RNA.717-201ENST00000517106 92 ntBASIC0.58□□□□□ -2.32
DFFAO00273 MIR5000-201ENST00000577717 103 ntBASIC0.58□□□□□ -2.32
DFFAO00273 PIGPP4-201ENST00000584447 307 ntBASIC0.58□□□□□ -2.32
DFFAO00273 PRELID3BP2-201ENST00000605362 201 ntBASIC0.58□□□□□ -2.32
DFFAO00273 AC004832.4-201ENST00000608952 331 ntBASIC0.58□□□□□ -2.32
DFFAO00273 CASC19-280ENST00000642102 1351 ntBASIC0.57□□□□□ -2.32
DFFAO00273 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
DFFAO00273 Y_RNA.184-201ENST00000363884 108 ntBASIC0.57□□□□□ -2.32
DFFAO00273 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.57□□□□□ -2.32
DFFAO00273 AC104332.1-201ENST00000440471 797 ntBASIC0.57□□□□□ -2.32
DFFAO00273 RPEP5-201ENST00000441137 268 ntBASIC0.57□□□□□ -2.32
DFFAO00273 DAP3P1-201ENST00000441522 278 ntBASIC0.57□□□□□ -2.32
DFFAO00273 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.57□□□□□ -2.32
DFFAO00273 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.57□□□□□ -2.32
DFFAO00273 PCMTD1P1-201ENST00000455560 355 ntBASIC0.57□□□□□ -2.32
DFFAO00273 AL049830.1-201ENST00000468034 425 ntBASIC0.57□□□□□ -2.32
DFFAO00273 AC010598.1-201ENST00000510378 103 ntBASIC0.57□□□□□ -2.32
DFFAO00273 AC093303.1-201ENST00000514549 295 ntBASIC0.57□□□□□ -2.32
DFFAO00273 RNU7-12P-201ENST00000516030 62 ntBASIC0.57□□□□□ -2.32
DFFAO00273 RNU6-1223P-201ENST00000517124 104 ntBASIC0.57□□□□□ -2.32
DFFAO00273 POLR3GP2-201ENST00000588366 668 ntBASIC0.57□□□□□ -2.32
DFFAO00273 AL117336.2-201ENST00000602435 335 ntBASIC0.57□□□□□ -2.32
DFFAO00273 AC121247.2-201ENST00000604776 136 ntBASIC0.57□□□□□ -2.32
DFFAO00273 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.57□□□□□ -2.32
DFFAO00273 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.57□□□□□ -2.32
DFFAO00273 AC023934.1-201ENST00000574529 2389 ntBASIC0.56□□□□□ -2.32
DFFAO00273 RNU6-254P-201ENST00000363377 107 ntBASIC0.56□□□□□ -2.32
DFFAO00273 Y_RNA.179-201ENST00000363844 90 ntBASIC0.56□□□□□ -2.32
DFFAO00273 Y_RNA.409-201ENST00000383990 98 ntBASIC0.56□□□□□ -2.32
DFFAO00273 Y_RNA.481-201ENST00000384373 102 ntBASIC0.56□□□□□ -2.32
DFFAO00273 MIR562-201ENST00000384894 95 ntBASIC0.56□□□□□ -2.32
DFFAO00273 RPL30P16-201ENST00000419341 429 ntBASIC0.56□□□□□ -2.32
DFFAO00273 SNORD111.1-201ENST00000516421 86 ntBASIC0.56□□□□□ -2.32
DFFAO00273 RNU7-172P-201ENST00000517125 64 ntBASIC0.56□□□□□ -2.32
DFFAO00273 AC091144.1-201ENST00000519573 138 ntBASIC0.56□□□□□ -2.32
DFFAO00273 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.56□□□□□ -2.32
DFFAO00273 AC010620.1-201ENST00000601088 1102 ntBASIC0.56□□□□□ -2.32
DFFAO00273 AL353765.1-201ENST00000605514 183 ntBASIC0.56□□□□□ -2.32
DFFAO00273 RNU6-89P-201ENST00000606519 100 ntBASIC0.56□□□□□ -2.32
DFFAO00273 AL096861.1-201ENST00000610899 123 ntBASIC0.56□□□□□ -2.32
DFFAO00273 AC104465.1-201ENST00000611365 139 ntBASIC0.56□□□□□ -2.32
DFFAO00273 AL391903.3-201ENST00000612158 163 ntBASIC0.56□□□□□ -2.32
DFFAO00273 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
DFFAO00273 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
DFFAO00273 MTND2P9-201ENST00000422293 931 ntBASIC0.55□□□□□ -2.32
DFFAO00273 ERLEC1P1-201ENST00000433806 578 ntBASIC0.55□□□□□ -2.32
DFFAO00273 FABP5P4-201ENST00000437203 171 ntBASIC0.55□□□□□ -2.32
DFFAO00273 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.55□□□□□ -2.32
DFFAO00273 AC091021.1-201ENST00000468051 388 ntBASIC0.55□□□□□ -2.32
DFFAO00273 COX6CP6-201ENST00000490840 228 ntBASIC0.55□□□□□ -2.32
DFFAO00273 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.55□□□□□ -2.32
DFFAO00273 RNA5SP220-201ENST00000516298 104 ntBASIC0.55□□□□□ -2.32
DFFAO00273 RNU6-341P-201ENST00000516973 96 ntBASIC0.55□□□□□ -2.32
DFFAO00273 RPL21P9-201ENST00000556149 474 ntBASIC0.55□□□□□ -2.32
DFFAO00273 MTND1P15-201ENST00000579262 949 ntBASIC0.55□□□□□ -2.32
DFFAO00273 AC091178.2-201ENST00000584401 117 ntBASIC0.55□□□□□ -2.32
DFFAO00273 MIR6734-201ENST00000621166 68 ntBASIC0.55□□□□□ -2.32
DFFAO00273 AC099654.12-201ENST00000639868 649 ntBASIC0.55□□□□□ -2.32
DFFAO00273 AC005592.1-201ENST00000566527 1640 ntBASIC0.55□□□□□ -2.32
DFFAO00273 MIRLET7C-201ENST00000362160 84 ntBASIC0.54□□□□□ -2.32
DFFAO00273 SNORA1B-201ENST00000362535 133 ntBASIC0.54□□□□□ -2.32
DFFAO00273 Y_RNA.267-201ENST00000364679 109 ntBASIC0.54□□□□□ -2.32
DFFAO00273 RNU4-12P-201ENST00000365233 139 ntBASIC0.54□□□□□ -2.32
DFFAO00273 RNU6-110P-201ENST00000384508 104 ntBASIC0.54□□□□□ -2.32
DFFAO00273 RNU6-95P-201ENST00000384697 107 ntBASIC0.54□□□□□ -2.32
DFFAO00273 RNA5SP482-201ENST00000391269 118 ntBASIC0.54□□□□□ -2.32
DFFAO00273 AL035398.1-201ENST00000430869 322 ntBASIC0.54□□□□□ -2.32
DFFAO00273 NDUFA5P4-201ENST00000436704 385 ntBASIC0.54□□□□□ -2.32
DFFAO00273 snoU13.25-201ENST00000458945 104 ntBASIC0.54□□□□□ -2.32
DFFAO00273 AP002004.2-201ENST00000531656 154 ntBASIC0.54□□□□□ -2.32
DFFAO00273 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.54□□□□□ -2.32
DFFAO00273 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.54□□□□□ -2.32
DFFAO00273 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
DFFAO00273 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
DFFAO00273 Y_RNA.553-201ENST00000384670 102 ntBASIC0.53□□□□□ -2.32
DFFAO00273 MIR517A-201ENST00000385001 87 ntBASIC0.53□□□□□ -2.32
DFFAO00273 MIR10B-201ENST00000385011 110 ntBASIC0.53□□□□□ -2.32
DFFAO00273 MTCO1P19-201ENST00000443487 500 ntBASIC0.53□□□□□ -2.32
DFFAO00273 MTND1P11-201ENST00000456661 876 ntBASIC0.53□□□□□ -2.32
DFFAO00273 AC107401.1-201ENST00000503426 685 ntBASIC0.53□□□□□ -2.32
DFFAO00273 ACA59.1-201ENST00000515966 143 ntBASIC0.53□□□□□ -2.32
DFFAO00273 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
DFFAO00273 AC022868.1-201ENST00000517767 391 ntBASIC0.53□□□□□ -2.32
DFFAO00273 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.53□□□□□ -2.32
DFFAO00273 AL158211.1-201ENST00000566763 763 ntBASIC0.53□□□□□ -2.32
DFFAO00273 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
DFFAO00273 Y_RNA.372-201ENST00000365599 102 ntBASIC0.52□□□□□ -2.33
DFFAO00273 SNORA20B-201ENST00000384220 132 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms