Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 MIR1253-201ENST00000408273 105 ntBASIC2.8□□□□□ -1.96
CBX4O00257 MIR1298-201ENST00000408783 112 ntBASIC2.8□□□□□ -1.96
CBX4O00257 AC010154.1-201ENST00000425857 269 ntBASIC2.8□□□□□ -1.96
CBX4O00257 Z98949.2-201ENST00000440996 144 ntBASIC2.8□□□□□ -1.96
CBX4O00257 RPL23AP7-203ENST00000449021 469 ntBASIC2.8□□□□□ -1.96
CBX4O00257 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
CBX4O00257 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.8□□□□□ -1.96
CBX4O00257 AC027419.1-201ENST00000522976 328 ntBASIC2.8□□□□□ -1.96
CBX4O00257 AC073349.3-201ENST00000617616 186 ntBASIC2.8□□□□□ -1.96
CBX4O00257 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
CBX4O00257 Y_RNA.76-201ENST00000362931 109 ntBASIC2.79□□□□□ -1.96
CBX4O00257 Y_RNA.292-201ENST00000364904 97 ntBASIC2.79□□□□□ -1.96
CBX4O00257 Y_RNA.341-201ENST00000365341 102 ntBASIC2.79□□□□□ -1.96
CBX4O00257 RNU2-14P-201ENST00000411053 191 ntBASIC2.79□□□□□ -1.96
CBX4O00257 RPS29P6-201ENST00000438196 145 ntBASIC2.79□□□□□ -1.96
CBX4O00257 Y_RNA.638-201ENST00000459374 113 ntBASIC2.79□□□□□ -1.96
CBX4O00257 TRBV12-1-201ENST00000479785 344 ntBASIC2.79□□□□□ -1.96
CBX4O00257 RNU6-138P-201ENST00000515952 107 ntBASIC2.79□□□□□ -1.96
CBX4O00257 RNU6-1146P-201ENST00000516282 102 ntBASIC2.79□□□□□ -1.96
CBX4O00257 RPPH1-2P-201ENST00000516688 293 ntBASIC2.79□□□□□ -1.96
CBX4O00257 Y_RNA.700-201ENST00000516806 100 ntBASIC2.79□□□□□ -1.96
CBX4O00257 AC136628.3-201ENST00000521868 290 ntBASIC2.79□□□□□ -1.96
CBX4O00257 AC130289.1-201ENST00000577321 73 ntBASIC2.79□□□□□ -1.96
CBX4O00257 MIR4282-201ENST00000583613 67 ntBASIC2.79□□□□□ -1.96
CBX4O00257 MIR6733-201ENST00000635723 61 ntBASIC2.79□□□□□ -1.96
CBX4O00257 Y_RNA.83-201ENST00000363005 113 ntBASIC2.78□□□□□ -1.96
CBX4O00257 Y_RNA.124-201ENST00000363339 93 ntBASIC2.78□□□□□ -1.96
CBX4O00257 RNU1-91P-201ENST00000364746 163 ntBASIC2.78□□□□□ -1.96
CBX4O00257 Y_RNA.456-201ENST00000384232 111 ntBASIC2.78□□□□□ -1.96
CBX4O00257 RNU6-160P-201ENST00000384591 107 ntBASIC2.78□□□□□ -1.96
CBX4O00257 SNORA26.7-201ENST00000391288 122 ntBASIC2.78□□□□□ -1.96
CBX4O00257 MIR887-201ENST00000401258 79 ntBASIC2.78□□□□□ -1.96
CBX4O00257 RNA5SP21-201ENST00000410917 96 ntBASIC2.78□□□□□ -1.96
CBX4O00257 RNA5SP508-201ENST00000411327 119 ntBASIC2.78□□□□□ -1.96
CBX4O00257 BTF3P11-201ENST00000426582 477 ntBASIC2.78□□□□□ -1.96
CBX4O00257 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.78□□□□□ -1.96
CBX4O00257 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.78□□□□□ -1.96
CBX4O00257 SNORD2.1-201ENST00000458762 69 ntBASIC2.78□□□□□ -1.96
CBX4O00257 COX6CP14-201ENST00000469580 174 ntBASIC2.78□□□□□ -1.96
CBX4O00257 RPS26P55-201ENST00000471178 356 ntBASIC2.78□□□□□ -1.96
CBX4O00257 RNA5SP76-201ENST00000516277 87 ntBASIC2.78□□□□□ -1.96
CBX4O00257 SNORA9.3-201ENST00000516383 129 ntBASIC2.78□□□□□ -1.96
CBX4O00257 AC087441.2-201ENST00000529141 262 ntBASIC2.78□□□□□ -1.96
CBX4O00257 MIR3605-201ENST00000583214 100 ntBASIC2.78□□□□□ -1.96
CBX4O00257 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.78□□□□□ -1.96
CBX4O00257 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.78□□□□□ -1.96
CBX4O00257 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CBX4O00257 AP006437.1-201ENST00000641440 3685 ntBASIC2.78□□□□□ -1.97
CBX4O00257 Y_RNA.199-201ENST00000364014 102 ntBASIC2.77□□□□□ -1.97
CBX4O00257 Y_RNA.368-201ENST00000365547 113 ntBASIC2.77□□□□□ -1.97
CBX4O00257 RNU6-651P-201ENST00000411040 105 ntBASIC2.77□□□□□ -1.97
CBX4O00257 AL139156.1-201ENST00000412785 841 ntBASIC2.77□□□□□ -1.97
CBX4O00257 AC016909.1-201ENST00000415916 166 ntBASIC2.77□□□□□ -1.97
CBX4O00257 HSPE1P13-201ENST00000451143 297 ntBASIC2.77□□□□□ -1.97
CBX4O00257 RPS27P22-201ENST00000478056 241 ntBASIC2.77□□□□□ -1.97
CBX4O00257 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.77□□□□□ -1.97
CBX4O00257 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.77□□□□□ -1.97
CBX4O00257 RNA5SP20-201ENST00000515976 84 ntBASIC2.77□□□□□ -1.97
CBX4O00257 SNORD116-28-201ENST00000516123 91 ntBASIC2.77□□□□□ -1.97
CBX4O00257 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.77□□□□□ -1.97
CBX4O00257 CYCSP26-201ENST00000534107 320 ntBASIC2.77□□□□□ -1.97
CBX4O00257 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.77□□□□□ -1.97
CBX4O00257 MIR3126-201ENST00000577443 74 ntBASIC2.77□□□□□ -1.97
CBX4O00257 snoU18.1-201ENST00000629629 71 ntBASIC2.77□□□□□ -1.97
CBX4O00257 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.76□□□□□ -1.97
CBX4O00257 MIR340-201ENST00000362125 95 ntBASIC2.76□□□□□ -1.97
CBX4O00257 Y_RNA.287-201ENST00000364853 94 ntBASIC2.76□□□□□ -1.97
CBX4O00257 Y_RNA.297-201ENST00000364950 91 ntBASIC2.76□□□□□ -1.97
CBX4O00257 RNU6-211P-201ENST00000384047 107 ntBASIC2.76□□□□□ -1.97
CBX4O00257 RNU6-1072P-201ENST00000384703 107 ntBASIC2.76□□□□□ -1.97
CBX4O00257 RNU6-443P-201ENST00000384780 107 ntBASIC2.76□□□□□ -1.97
CBX4O00257 MIR9-1-201ENST00000385198 89 ntBASIC2.76□□□□□ -1.97
CBX4O00257 MTND5P15-201ENST00000434246 349 ntBASIC2.76□□□□□ -1.97
CBX4O00257 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.76□□□□□ -1.97
CBX4O00257 AP005660.1-201ENST00000522972 293 ntBASIC2.76□□□□□ -1.97
CBX4O00257 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.76□□□□□ -1.97
CBX4O00257 AL137100.2-201ENST00000555786 315 ntBASIC2.76□□□□□ -1.97
CBX4O00257 AL078604.3-201ENST00000615580 211 ntBASIC2.76□□□□□ -1.97
CBX4O00257 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CBX4O00257 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CBX4O00257 CENPCP1-201ENST00000533085 2578 ntBASIC2.75□□□□□ -1.97
CBX4O00257 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CBX4O00257 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CBX4O00257 RNY4P28-201ENST00000365281 93 ntBASIC2.75□□□□□ -1.97
CBX4O00257 SNORA40.19-201ENST00000390846 128 ntBASIC2.75□□□□□ -1.97
CBX4O00257 RNU6-763P-201ENST00000390865 106 ntBASIC2.75□□□□□ -1.97
CBX4O00257 MIR1262-201ENST00000408276 93 ntBASIC2.75□□□□□ -1.97
CBX4O00257 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
CBX4O00257 AL138752.1-201ENST00000452964 351 ntBASIC2.75□□□□□ -1.97
CBX4O00257 RNU1-131P-201ENST00000458943 161 ntBASIC2.75□□□□□ -1.97
CBX4O00257 AC010409.1-201ENST00000487382 476 ntBASIC2.75□□□□□ -1.97
CBX4O00257 AC008413.1-201ENST00000511864 177 ntBASIC2.75□□□□□ -1.97
CBX4O00257 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CBX4O00257 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CBX4O00257 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.74□□□□□ -1.97
CBX4O00257 RNU6-859P-201ENST00000362728 107 ntBASIC2.74□□□□□ -1.97
CBX4O00257 Y_RNA.310-201ENST00000365063 113 ntBASIC2.74□□□□□ -1.97
CBX4O00257 Y_RNA.626-201ENST00000411288 95 ntBASIC2.74□□□□□ -1.97
CBX4O00257 RNA5SP492-201ENST00000411330 114 ntBASIC2.74□□□□□ -1.97
CBX4O00257 AC060773.1-201ENST00000421698 310 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms