Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-1264P-201ENST00000383891 107 ntBASIC0.71□□□□□ -2.3
SMKR1H3BMG3 RPS26P48-201ENST00000491713 339 ntBASIC0.71□□□□□ -2.3
SMKR1H3BMG3 AC018710.1-201ENST00000506509 158 ntBASIC0.71□□□□□ -2.3
SMKR1H3BMG3 RNU6-864P-201ENST00000516256 108 ntBASIC0.71□□□□□ -2.3
SMKR1H3BMG3 AC109635.3-201ENST00000529536 185 ntBASIC0.71□□□□□ -2.3
SMKR1H3BMG3 AP002001.1-203ENST00000534002 267 ntBASIC0.71□□□□□ -2.3
SMKR1H3BMG3 AC068790.6-201ENST00000602558 258 ntBASIC0.71□□□□□ -2.3
SMKR1H3BMG3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.7□□□□□ -2.3
SMKR1H3BMG3 AC008163.1-202ENST00000636004 2889 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 RNU6-222P-201ENST00000362438 107 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 SNORA27.1-201ENST00000362604 124 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 Y_RNA.106-201ENST00000363189 100 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 RNU6-1090P-201ENST00000364065 94 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 RNU6-407P-201ENST00000365280 104 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 RNU6-969P-201ENST00000383900 105 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 Y_RNA.559-201ENST00000384686 107 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 RNU6-376P-201ENST00000384731 106 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 AC018865.2-201ENST00000423631 129 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 AL121890.1-201ENST00000435457 205 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 LINC01399-202ENST00000458450 244 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.7□□□□□ -2.3
SMKR1H3BMG3 AC005858.4-201ENST00000623191 700 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 AC090617.10-201ENST00000624308 134 ntBASIC0.7□□□□□ -2.3
SMKR1H3BMG3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.7□□□□□ -2.3
SMKR1H3BMG3 MIRLET7C-201ENST00000362160 84 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 SNORA7.1-201ENST00000363750 139 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 RNU4-38P-201ENST00000364472 129 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 SNORD116-2-201ENST00000384274 95 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 SNORD116-6-201ENST00000384711 96 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 MIR329-1-201ENST00000385028 80 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 MIR634-201ENST00000385208 97 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 RNU6-1001P-201ENST00000411265 100 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 RNU2-64P-201ENST00000411315 191 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 ELOCP21-201ENST00000412558 336 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 USP9YP30-201ENST00000430729 455 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 AC104332.1-201ENST00000440471 797 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 UQCRBP2-201ENST00000447827 297 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.69□□□□□ -2.3
SMKR1H3BMG3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.69□□□□□ -2.3
SMKR1H3BMG3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 RNU6-273P-201ENST00000516937 96 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 RNU1-54P-201ENST00000517181 120 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 AC090142.3-201ENST00000519012 385 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 MTND2P38-201ENST00000522536 667 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.69□□□□□ -2.3
SMKR1H3BMG3 AC024909.2-201ENST00000553035 286 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 AC245505.1-201ENST00000556398 224 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 AL117336.2-201ENST00000602435 335 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 AF250324.2-201ENST00000608299 610 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 AL157834.3-201ENST00000615543 103 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 AC073544.1-201ENST00000600110 1595 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 MTND5P16-201ENST00000460269 1703 ntBASIC0.69□□□□□ -2.3
SMKR1H3BMG3 RNU6-1059P-201ENST00000363752 98 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 Y_RNA.402-201ENST00000383972 102 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 RNU6-1013P-201ENST00000384180 107 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 RNU6-842P-201ENST00000384269 107 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 Y_RNA.500-201ENST00000384466 111 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.68□□□□□ -2.3
SMKR1H3BMG3 EIF1P2-201ENST00000428233 350 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 MTND4LP16-201ENST00000440828 295 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 AL137792.2-201ENST00000443484 235 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 RNU7-21P-201ENST00000459430 62 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 AL049830.1-201ENST00000468034 425 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 RNU6-566P-201ENST00000516790 107 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 RNU6-1088P-201ENST00000516850 104 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 RNU6-1314P-201ENST00000517139 104 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 AL358944.1-201ENST00000528537 144 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 MIR4295-201ENST00000585286 85 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 AC125232.2-201ENST00000592457 143 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 AC013244.2-201ENST00000603396 103 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 AC103591.3-201ENST00000608684 209 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 AC004832.4-201ENST00000608952 331 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 AL353770.2-201ENST00000620024 78 ntBASIC0.68□□□□□ -2.3
SMKR1H3BMG3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SMKR1H3BMG3 RNU1-17P-201ENST00000363022 152 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 Y_RNA.194-201ENST00000363985 102 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.67□□□□□ -2.3
SMKR1H3BMG3 RNU6-1145P-201ENST00000384246 107 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 Y_RNA.517-201ENST00000384551 106 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 MIR181A1-201ENST00000385026 110 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 MIR520G-201ENST00000385064 90 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 RNU5A-5P-201ENST00000411054 116 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AC009161.1-201ENST00000417306 376 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AC009474.2-201ENST00000451383 136 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 SNORD5.1-201ENST00000458800 75 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.67□□□□□ -2.3
SMKR1H3BMG3 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AC074133.1-201ENST00000515696 183 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.67□□□□□ -2.3
SMKR1H3BMG3 CBX3P8-201ENST00000532412 525 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.67□□□□□ -2.3
SMKR1H3BMG3 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms