Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3BM21 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3BM21 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
H3BM21 RNA5SP124-201ENST00000362739 110 ntBASIC3.83□□□□□ -1.8
H3BM21 RNU6-525P-201ENST00000363685 104 ntBASIC3.83□□□□□ -1.8
H3BM21 SNORD45B-201ENST00000364617 72 ntBASIC3.83□□□□□ -1.8
H3BM21 SNORA2.2-201ENST00000365473 135 ntBASIC3.83□□□□□ -1.8
H3BM21 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
H3BM21 SNORA12-201ENST00000391162 147 ntBASIC3.83□□□□□ -1.8
H3BM21 CRYBB2P1-203ENST00000415709 538 ntBASIC3.83□□□□□ -1.8
H3BM21 AC004486.1-201ENST00000546846 233 ntBASIC3.83□□□□□ -1.8
H3BM21 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
H3BM21 MIR4712-201ENST00000583750 82 ntBASIC3.83□□□□□ -1.8
H3BM21 RPL17P51-201ENST00000605218 238 ntBASIC3.83□□□□□ -1.8
H3BM21 AC145423.2-201ENST00000610631 239 ntBASIC3.83□□□□□ -1.8
H3BM21 AC012531.5-201ENST00000611375 151 ntBASIC3.83□□□□□ -1.8
H3BM21 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.83□□□□□ -1.8
H3BM21 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3BM21 IPO8P1-201ENST00000455509 3109 ntBASIC3.83□□□□□ -1.8
H3BM21 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.82□□□□□ -1.8
H3BM21 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.82□□□□□ -1.8
H3BM21 RNU6-50P-201ENST00000362356 103 ntBASIC3.82□□□□□ -1.8
H3BM21 RNU6-509P-201ENST00000363519 107 ntBASIC3.82□□□□□ -1.8
H3BM21 SNRPGP13-201ENST00000442212 177 ntBASIC3.82□□□□□ -1.8
H3BM21 RNU6-221P-201ENST00000459541 99 ntBASIC3.82□□□□□ -1.8
H3BM21 AC107626.1-201ENST00000471084 183 ntBASIC3.82□□□□□ -1.8
H3BM21 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.82□□□□□ -1.8
H3BM21 AC026726.1-201ENST00000512859 601 ntBASIC3.82□□□□□ -1.8
H3BM21 RNU7-172P-201ENST00000517125 64 ntBASIC3.82□□□□□ -1.8
H3BM21 MIR4305-201ENST00000583252 102 ntBASIC3.82□□□□□ -1.8
H3BM21 RPS15AP11-201ENST00000594193 385 ntBASIC3.82□□□□□ -1.8
H3BM21 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.82□□□□□ -1.8
H3BM21 AC069200.1-201ENST00000609511 323 ntBASIC3.82□□□□□ -1.8
H3BM21 MIR1255B1-201ENST00000636325 63 ntBASIC3.82□□□□□ -1.8
H3BM21 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
H3BM21 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3BM21 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3BM21 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.81□□□□□ -1.8
H3BM21 MAPK10-373ENST00000641983 6772 ntBASIC3.81□□□□□ -1.8
H3BM21 AC091564.4-201ENST00000533934 2194 ntBASIC3.81□□□□□ -1.8
H3BM21 RNU6-616P-201ENST00000384353 107 ntBASIC3.81□□□□□ -1.8
H3BM21 Y_RNA.545-201ENST00000384652 105 ntBASIC3.81□□□□□ -1.8
H3BM21 MIR518F-201ENST00000384973 87 ntBASIC3.81□□□□□ -1.8
H3BM21 MIR605-201ENST00000385078 83 ntBASIC3.81□□□□□ -1.8
H3BM21 MIR493-201ENST00000385254 89 ntBASIC3.81□□□□□ -1.8
H3BM21 RNA5SP129-201ENST00000410276 118 ntBASIC3.81□□□□□ -1.8
H3BM21 YME1L1P1-201ENST00000429435 297 ntBASIC3.81□□□□□ -1.8
H3BM21 AC026403.1-201ENST00000518938 295 ntBASIC3.81□□□□□ -1.8
H3BM21 MIR3690-201ENST00000580266 75 ntBASIC3.81□□□□□ -1.8
H3BM21 MIR3618-201ENST00000580330 88 ntBASIC3.81□□□□□ -1.8
H3BM21 MIR3117-201ENST00000584034 78 ntBASIC3.81□□□□□ -1.8
H3BM21 AC073413.2-201ENST00000604332 360 ntBASIC3.81□□□□□ -1.8
H3BM21 AC087741.2-201ENST00000619415 172 ntBASIC3.81□□□□□ -1.8
H3BM21 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3BM21 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.81□□□□□ -1.8
H3BM21 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.81□□□□□ -1.8
H3BM21 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3BM21 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
H3BM21 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
H3BM21 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3BM21 FAM35DP-201ENST00000323387 2712 ntBASIC3.8□□□□□ -1.8
H3BM21 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.8□□□□□ -1.8
H3BM21 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
H3BM21 RNU6-1010P-201ENST00000362757 107 ntBASIC3.8□□□□□ -1.8
H3BM21 RNU6-363P-201ENST00000362895 105 ntBASIC3.8□□□□□ -1.8
H3BM21 Y_RNA.95-201ENST00000363079 95 ntBASIC3.8□□□□□ -1.8
H3BM21 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.8□□□□□ -1.8
H3BM21 AL161651.1-201ENST00000440882 223 ntBASIC3.8□□□□□ -1.8
H3BM21 PRSS3P4-201ENST00000453323 162 ntBASIC3.8□□□□□ -1.8
H3BM21 RPS27P22-201ENST00000478056 241 ntBASIC3.8□□□□□ -1.8
H3BM21 RNU1-95P-201ENST00000516357 160 ntBASIC3.8□□□□□ -1.8
H3BM21 RNU1-128P-201ENST00000516704 160 ntBASIC3.8□□□□□ -1.8
H3BM21 RNU6-1098P-201ENST00000516772 96 ntBASIC3.8□□□□□ -1.8
H3BM21 RNU7-70P-201ENST00000516941 66 ntBASIC3.8□□□□□ -1.8
H3BM21 AC006435.5-201ENST00000624486 112 ntBASIC3.8□□□□□ -1.8
H3BM21 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H3BM21 AC004944.1-201ENST00000517807 3059 ntBASIC3.8□□□□□ -1.8
H3BM21 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.8□□□□□ -1.8
H3BM21 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3BM21 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3BM21 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
H3BM21 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
H3BM21 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.79□□□□□ -1.8
H3BM21 SNORA63.1-201ENST00000362493 131 ntBASIC3.79□□□□□ -1.8
H3BM21 SNORA5A-201ENST00000384111 134 ntBASIC3.79□□□□□ -1.8
H3BM21 Y_RNA.467-201ENST00000384297 102 ntBASIC3.79□□□□□ -1.8
H3BM21 MIR199A2-201ENST00000385289 110 ntBASIC3.79□□□□□ -1.8
H3BM21 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
H3BM21 MIR1283-1-201ENST00000408494 87 ntBASIC3.79□□□□□ -1.8
H3BM21 RNU6-57P-201ENST00000411348 103 ntBASIC3.79□□□□□ -1.8
H3BM21 RNU1-131P-201ENST00000458943 161 ntBASIC3.79□□□□□ -1.8
H3BM21 RNU2-35P-201ENST00000516446 142 ntBASIC3.79□□□□□ -1.8
H3BM21 RNU5F-4P-201ENST00000516581 114 ntBASIC3.79□□□□□ -1.8
H3BM21 RNA5SP468-201ENST00000516782 93 ntBASIC3.79□□□□□ -1.8
H3BM21 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.79□□□□□ -1.8
H3BM21 AL161756.2-201ENST00000604597 246 ntBASIC3.79□□□□□ -1.8
H3BM21 MIR203B-201ENST00000636080 86 ntBASIC3.79□□□□□ -1.8
H3BM21 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.79□□□□□ -1.8
H3BM21 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
H3BM21 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms