Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-879P-201ENST00000364328 108 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-1019P-201ENST00000364424 107 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.259-201ENST00000364619 101 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-1240P-201ENST00000365155 104 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.356-201ENST00000365475 113 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-417P-201ENST00000384712 107 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.592-201ENST00000410274 109 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 AF228730.4-201ENST00000421457 183 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 UBE2V1P7-201ENST00000446395 340 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 SNORD19B-201ENST00000459623 84 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 AC005840.1-201ENST00000498412 377 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 AC105758.1-201ENST00000506038 399 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 RN7SKP49-201ENST00000516675 260 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 AC022868.1-201ENST00000517767 391 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 CYCSP23-201ENST00000519781 313 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 AC084781.2-201ENST00000615568 161 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 U6.108-201ENST00000637764 58 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 AC010615.1-201ENST00000594254 1764 ntBASIC1.52□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.67-201ENST00000362870 100 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 RNY1P10-201ENST00000363268 113 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 SNORA63D-201ENST00000364359 132 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 RNA5SP467-201ENST00000391274 118 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 AC004965.1-201ENST00000413033 213 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 AC008134.1-201ENST00000420943 193 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 PCNPP5-201ENST00000452246 481 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 TRMT112P2-201ENST00000512910 132 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 AC069114.2-201ENST00000604699 304 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 AC138305.3-201ENST00000624988 240 ntBASIC1.51□□□□□ -2.17
NEDD8-MDP1E9PL57 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 AL391987.6-201ENST00000305671 199 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.58-201ENST00000362807 102 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-490P-201ENST00000362985 107 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.154-201ENST00000363624 102 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 SNORA7.1-201ENST00000363750 139 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.187-201ENST00000363918 113 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 RNY3P1-201ENST00000365085 102 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 RNY3-201ENST00000365484 102 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 SNORA69.1-201ENST00000390904 137 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 AC114482.1-201ENST00000418010 247 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 AC027575.1-201ENST00000481064 460 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 MTND3P22-201ENST00000510932 243 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-1146P-201ENST00000516282 102 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-970P-201ENST00000516312 107 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.675-201ENST00000516389 149 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-699P-201ENST00000517081 110 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 MIR2355-201ENST00000517199 87 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 RNA5SP437-201ENST00000517249 129 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 AP002001.1-203ENST00000534002 267 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 MIR4421-201ENST00000578133 69 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.5□□□□□ -2.17
NEDD8-MDP1E9PL57 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 MIR410-201ENST00000362222 80 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 RNY3P11-201ENST00000364153 102 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-1040P-201ENST00000383974 107 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-439P-201ENST00000384188 106 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.463-201ENST00000384271 102 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 MIR520A-201ENST00000384862 85 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 MIR625-201ENST00000385047 85 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 MTND4LP11-201ENST00000422184 280 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 MTND4P28-201ENST00000426217 387 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 CHEK2P4-201ENST00000450340 246 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 SNORD65B-201ENST00000459126 73 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 AC074133.1-201ENST00000515696 183 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 RAB11AP2-201ENST00000545905 639 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 AL117336.2-201ENST00000602435 335 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 Y_RNA.804-201ENST00000615262 101 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 AC091925.1-201ENST00000623204 462 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 AC073544.1-201ENST00000600110 1595 ntBASIC1.49□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU4-73P-201ENST00000363164 141 ntBASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-1264P-201ENST00000383891 107 ntBASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 MIR1253-201ENST00000408273 105 ntBASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 TOMM22P2-201ENST00000430735 237 ntBASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 UQCRBP2-201ENST00000447827 297 ntBASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU6-107P-201ENST00000516643 102 ntBASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 RNU7-128P-201ENST00000517247 62 ntBASIC1.48□□□□□ -2.17
NEDD8-MDP1E9PL57 AC018448.1-201ENST00000552843 316 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms