Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC004975.1-201ENST00000428733 208 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 RPS29P31-201ENST00000446147 164 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 RNU1-131P-201ENST00000458943 161 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 AL049830.1-201ENST00000468034 425 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 RNU6-991P-201ENST00000516168 107 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 DEFB131E-201ENST00000532329 154 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 MIR7157-201ENST00000635801 60 ntBASIC4.05□□□□□ -1.76
RCCD1A6NED2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RCCD1A6NED2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RCCD1A6NED2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.05□□□□□ -1.76
RCCD1A6NED2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RCCD1A6NED2 MIR340-201ENST00000362125 95 ntBASIC4.04□□□□□ -1.76
RCCD1A6NED2 Y_RNA.37-201ENST00000362606 108 ntBASIC4.04□□□□□ -1.76
RCCD1A6NED2 RNA5SP295-201ENST00000362655 121 ntBASIC4.04□□□□□ -1.76
RCCD1A6NED2 RNU7-123P-201ENST00000515911 60 ntBASIC4.04□□□□□ -1.76
RCCD1A6NED2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.04□□□□□ -1.76
RCCD1A6NED2 MIR4738-201ENST00000579134 87 ntBASIC4.04□□□□□ -1.76
RCCD1A6NED2 SNORA62.6-201ENST00000606322 83 ntBASIC4.04□□□□□ -1.76
RCCD1A6NED2 MIR6867-201ENST00000610636 67 ntBASIC4.04□□□□□ -1.76
RCCD1A6NED2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.04□□□□□ -1.76
RCCD1A6NED2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RCCD1A6NED2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
RCCD1A6NED2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RCCD1A6NED2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RCCD1A6NED2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.03□□□□□ -1.76
RCCD1A6NED2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.03□□□□□ -1.76
RCCD1A6NED2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RCCD1A6NED2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCCD1A6NED2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCCD1A6NED2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RCCD1A6NED2 SNORD14E-201ENST00000364009 85 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 RNU6-1104P-201ENST00000384723 104 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 RNA5SP467-201ENST00000391274 118 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 SCARNA23-201ENST00000516060 130 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 RNU7-25P-201ENST00000516544 62 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 RNU1-142P-201ENST00000516682 145 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 SCARNA3-201ENST00000517097 143 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 AP002004.2-201ENST00000531656 154 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.03□□□□□ -1.76
RCCD1A6NED2 MIR4778-201ENST00000577635 80 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 MIR4305-201ENST00000583252 102 ntBASIC4.03□□□□□ -1.76
RCCD1A6NED2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCCD1A6NED2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCCD1A6NED2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.03□□□□□ -1.77
RCCD1A6NED2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
RCCD1A6NED2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RCCD1A6NED2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RCCD1A6NED2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RCCD1A6NED2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RCCD1A6NED2 MIR218-1-201ENST00000384999 110 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 RNU6-816P-201ENST00000390914 107 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 RNU6-1268P-201ENST00000391214 107 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 RNU6-1239P-201ENST00000391310 107 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.02□□□□□ -1.77
RCCD1A6NED2 AL356095.1-201ENST00000417217 199 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 AC009238.1-201ENST00000442165 424 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 AC009237.6-201ENST00000446969 424 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 CYP2C59P-201ENST00000457790 269 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 MIR2116-201ENST00000517221 80 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 MIR3683-201ENST00000580847 82 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.02□□□□□ -1.77
RCCD1A6NED2 AC025521.1-201ENST00000621624 286 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 AC068724.3-201ENST00000625906 87 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.02□□□□□ -1.77
RCCD1A6NED2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RCCD1A6NED2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RCCD1A6NED2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
RCCD1A6NED2 RNY3P2-201ENST00000362918 102 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 SNORA14A-201ENST00000364773 135 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 Y_RNA.440-201ENST00000384120 114 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 Y_RNA.466-201ENST00000384294 113 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 RNU6-893P-201ENST00000458841 100 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 CKS1BP2-201ENST00000497342 240 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 SCARNA14-201ENST00000516903 136 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 AC022523.2-201ENST00000561045 150 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 AC007224.1-201ENST00000564410 144 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 AC110079.1-202ENST00000635213 138 ntBASIC4.01□□□□□ -1.77
RCCD1A6NED2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RCCD1A6NED2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4□□□□□ -1.77
RCCD1A6NED2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RCCD1A6NED2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RCCD1A6NED2 SNORA1B-201ENST00000362535 133 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 RNY1P10-201ENST00000363268 113 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 Y_RNA.547-201ENST00000384654 119 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 MIR708-201ENST00000390708 88 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 FO393413.1-201ENST00000402892 195 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 AL138878.1-201ENST00000405131 347 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 RPL23AP48-201ENST00000406913 488 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 AL445646.1-201ENST00000431784 216 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 AL353689.1-201ENST00000438895 199 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 AL357552.1-201ENST00000445254 415 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 RNU7-80P-201ENST00000459562 61 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 RNU7-94P-201ENST00000459576 63 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 RN7SKP21-201ENST00000516503 220 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4□□□□□ -1.77
RCCD1A6NED2 AC022695.1-201ENST00000522089 237 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4□□□□□ -1.77
RCCD1A6NED2 DLEU2_5.2-201ENST00000610606 84 ntBASIC4□□□□□ -1.77
RCCD1A6NED2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms