Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 LINC01399-202ENST00000458450 244 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 AC010531.2-201ENST00000465012 153 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 AP003733.2-201ENST00000529409 171 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 MIR4423-201ENST00000580922 80 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 AC006380.1-201ENST00000603598 186 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
TRIM43BA6NCK2 RNU6-1266P-201ENST00000362794 105 ntBASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 RNU1-17P-201ENST00000363022 152 ntBASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 RNU1-52P-201ENST00000384190 164 ntBASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 SNORD115-46-201ENST00000390982 71 ntBASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 RPL23AP36-201ENST00000413895 458 ntBASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 AL357134.1-201ENST00000445848 426 ntBASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 AC025465.3-201ENST00000510570 311 ntBASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 U6.104-201ENST00000637979 90 ntBASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRIM43BA6NCK2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 Y_RNA.105-201ENST00000363182 111 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 SNORD113-8-201ENST00000363497 74 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 RNU6-806P-201ENST00000365147 105 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 RNU6-160P-201ENST00000384591 107 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 MIR1262-201ENST00000408276 93 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 Y_RNA.602-201ENST00000410535 92 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 AC008134.1-201ENST00000420943 193 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 MTCO1P44-201ENST00000441935 243 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 RNU6-221P-201ENST00000459541 99 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 SEPT14P8-201ENST00000508026 178 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 AP002001.1-203ENST00000534002 267 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 AC055872.1-201ENST00000570978 278 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 MIR4498-201ENST00000577599 66 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 SNORD113-5-201ENST00000607261 78 ntBASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM43BA6NCK2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 SNORD115-3-201ENST00000363100 82 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 Y_RNA.144-201ENST00000363521 113 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 Y_RNA.331-201ENST00000365267 102 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 RNU6-196P-201ENST00000384315 107 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 RNU6-121P-201ENST00000410525 99 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 AC096920.1-201ENST00000423991 241 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 AC005042.3-201ENST00000453230 174 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 MIR3684-201ENST00000579779 74 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 AL031274.2-201ENST00000599419 203 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 AC022441.3-201ENST00000605737 136 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 AC006001.4-201ENST00000622243 395 ntBASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRIM43BA6NCK2 Y_RNA.26-201ENST00000362539 101 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.101-201ENST00000363154 102 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.222-201ENST00000364264 102 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.512-201ENST00000384518 102 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 MIR29C-201ENST00000385231 88 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 RNU4-30P-201ENST00000410245 143 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 RNU2-54P-201ENST00000410299 190 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 RPL21P38-201ENST00000418090 167 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 RNU6-155P-201ENST00000516347 100 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 RNA5SP137-201ENST00000516833 135 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 MIR8062-201ENST00000621515 85 ntBASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
TRIM43BA6NCK2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.446-201ENST00000384178 104 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 MIR1302-6-201ENST00000408466 90 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 SNORA11.4-201ENST00000408823 129 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 RNU6-1053P-201ENST00000515930 101 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 RNU6-856P-201ENST00000516959 98 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 AC087441.2-201ENST00000529141 262 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 AL161670.1-201ENST00000554348 137 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 AC022202.1-201ENST00000613515 211 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 7SK.10-201ENST00000621414 298 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 AC005336.3-201ENST00000623833 2679 ntBASIC2.45□□□□□ -2.02
TRIM43BA6NCK2 RNU4-90P-201ENST00000362773 141 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 RNU6-454P-201ENST00000364292 107 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.461-201ENST00000384263 103 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 RNU6-463P-201ENST00000384340 107 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.556-201ENST00000384677 113 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 Y_RNA.581-201ENST00000391017 97 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 MIR1287-201ENST00000408492 90 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 AC098869.1-201ENST00000481627 292 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 AC108729.3-201ENST00000513484 108 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 RNU6-570P-201ENST00000517051 105 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 RNU2-12P-201ENST00000517216 168 ntBASIC2.44□□□□□ -2.02
TRIM43BA6NCK2 AC025647.1-201ENST00000517879 253 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms