Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 UBL5P3-201ENST00000475112 231 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 TRBV12-1-201ENST00000479785 344 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 YWHAEP4-201ENST00000505390 198 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 RNA5SP217-201ENST00000515959 91 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-856P-201ENST00000516959 98 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 AC009127.3-201ENST00000570531 403 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 AL031274.2-201ENST00000599419 203 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 SNORD14A-201ENST00000606526 91 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 snoU18.1-201ENST00000629629 71 ntBASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CCDC163A0A0D9SF12 AC008264.2-201ENST00000610193 3731 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 UBE2WP1-201ENST00000362030 340 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 Y_RNA.76-201ENST00000362931 109 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 RNU1-148P-201ENST00000384472 162 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 RNA5SP21-201ENST00000410917 96 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 RPL32P35-201ENST00000415214 394 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 HSPE1P21-201ENST00000438283 308 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 HMGN1P18-201ENST00000457642 277 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 AC011406.1-201ENST00000512440 370 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-237P-201ENST00000515985 71 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-63P-201ENST00000516690 95 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 SCARNA20.6-201ENST00000517251 106 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 FO624990.1-201ENST00000636373 85 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 AC134026.1-201ENST00000623249 2239 ntBASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC163A0A0D9SF12 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 ZNF271P-202ENST00000465539 1970 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 AL356292.1-201ENST00000283110 373 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 Y_RNA.122-201ENST00000363331 96 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-1048P-201ENST00000364054 107 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-1186P-201ENST00000410429 97 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RNU2-52P-201ENST00000410680 190 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RPL23AP7-203ENST00000449021 469 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RNU1-41P-201ENST00000516161 162 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RNU4-71P-201ENST00000516258 113 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-1146P-201ENST00000516282 102 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RNU1-48P-201ENST00000516400 162 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-1337P-201ENST00000516525 95 ntBASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC163A0A0D9SF12 RNU6-23P-201ENST00000363283 107 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 Y_RNA.172-201ENST00000363765 102 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 MTCO2P33-201ENST00000402100 465 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 RNA5SP270-201ENST00000411361 118 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 MTND5P15-201ENST00000434246 349 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 SNORD116-28-201ENST00000516123 91 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 AP005660.1-201ENST00000522972 293 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 AL137100.2-201ENST00000555786 315 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 MIR4438-201ENST00000585271 93 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.15-201ENST00000611544 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.16-201ENST00000613119 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.12-201ENST00000613778 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.20-201ENST00000613956 192 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.9-201ENST00000615427 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.11-201ENST00000616345 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.2-201ENST00000616535 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.3-201ENST00000617785 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.19-201ENST00000618602 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 RNU2-1-201ENST00000618664 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.6-201ENST00000619225 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.5-201ENST00000619465 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 U2.10-201ENST00000620268 191 ntBASIC2.84□□□□□ -1.95
CCDC163A0A0D9SF12 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.84□□□□□ -1.96
CCDC163A0A0D9SF12 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC163A0A0D9SF12 RNU6-801P-201ENST00000364087 105 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 RNA5SP493-201ENST00000364115 91 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.292-201ENST00000364904 97 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 RNU1-138P-201ENST00000384093 164 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 MIR518C-201ENST00000384822 101 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 RNU6-763P-201ENST00000390865 106 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 AL138827.1-201ENST00000402666 306 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 U8.19-201ENST00000459095 133 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 HMGB3P3-201ENST00000510526 400 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 AC136628.3-201ENST00000521868 290 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 AC087441.2-201ENST00000529141 262 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 AC245884.12-201ENST00000615364 59 ntBASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC163A0A0D9SF12 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 RNA5SP68-201ENST00000363885 119 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 Y_RNA.217-201ENST00000364214 105 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 RNU6-211P-201ENST00000384047 107 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 SNORA67.4-201ENST00000384688 142 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 MIR1298-201ENST00000408783 112 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 RNU2-14P-201ENST00000411053 191 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 AC011753.1-201ENST00000451001 220 ntBASIC2.82□□□□□ -1.96
CCDC163A0A0D9SF12 ATP5J2P3-201ENST00000451550 258 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms