Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 Y_RNA.76-201ENST00000362931 109 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.172-201ENST00000363765 102 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.217-201ENST00000364214 105 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU1-112P-201ENST00000364401 164 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.341-201ENST00000365341 102 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-417P-201ENST00000384712 107 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 MIR887-201ENST00000401258 79 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.590-201ENST00000410140 107 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNA5SP21-201ENST00000410917 96 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-847P-201ENST00000411115 108 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC063976.3-201ENST00000426849 329 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU1-131P-201ENST00000458943 161 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.641-201ENST00000459414 105 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 RPS26P55-201ENST00000471178 356 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 Y_RNA.679-201ENST00000516416 91 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 RNU6-1337P-201ENST00000516525 95 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC006023.1-201ENST00000603944 259 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC141273.2-201ENST00000618989 130 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 AC006435.5-201ENST00000624486 112 ntBASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
IGHV4-28A0A0C4DH34 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL356292.1-201ENST00000283110 373 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC062016.1-201ENST00000355719 319 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORD114-7-201ENST00000362520 77 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-1272P-201ENST00000362776 107 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 snoU2-30.2-201ENST00000362805 70 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-23P-201ENST00000363283 107 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNA5SP493-201ENST00000364115 91 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.287-201ENST00000364853 94 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.515-201ENST00000384535 112 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR196B-201ENST00000384852 84 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL590004.2-201ENST00000404787 371 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 BTF3P11-201ENST00000426582 477 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 CR769767.1-201ENST00000436337 346 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL353689.1-201ENST00000438895 199 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL109933.2-201ENST00000452651 260 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-1146P-201ENST00000516282 102 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC007536.1-201ENST00000533382 349 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC009127.3-201ENST00000570531 403 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR3605-201ENST00000583214 100 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORD14A-201ENST00000606526 91 ntBASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
IGHV4-28A0A0C4DH34 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 CENPCP1-201ENST00000533085 2578 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.122-201ENST00000363331 96 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-1048P-201ENST00000364054 107 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-801P-201ENST00000364087 105 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORD116-13-201ENST00000384408 92 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR9-1-201ENST00000385198 89 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-763P-201ENST00000390865 106 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORD58.1-201ENST00000391313 66 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU2-52P-201ENST00000410680 190 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU2-14P-201ENST00000411053 191 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 ATP5J2P3-201ENST00000451550 258 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 UBE2DNL-203ENST00000474922 222 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 YWHAEP4-201ENST00000505390 198 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORD116-28-201ENST00000516123 91 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU4-71P-201ENST00000516258 113 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 SNORA9.3-201ENST00000516383 129 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-63P-201ENST00000516690 95 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNA5SP137-201ENST00000516833 135 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RNU6-794P-201ENST00000517261 64 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 SUMO2P18-201ENST00000518873 252 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC136628.3-201ENST00000521868 290 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL137100.2-201ENST00000555786 315 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR3169-201ENST00000578032 83 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 MIR4438-201ENST00000585271 93 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 RPL12P50-201ENST00000603116 116 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 snoU18.1-201ENST00000629629 71 ntBASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
IGHV4-28A0A0C4DH34 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 AC134026.1-201ENST00000623249 2239 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 AL136360.1-201ENST00000503377 1900 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.82-201ENST00000363000 102 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.92-201ENST00000363043 102 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.235-201ENST00000364412 102 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.306-201ENST00000365015 102 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.310-201ENST00000365063 113 ntBASIC1.94□□□□□ -2.1
IGHV4-28A0A0C4DH34 Y_RNA.312-201ENST00000365089 102 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms