Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL365184.2-201ENST00000431139 435 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 AL392103.1-201ENST00000447000 198 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 SCARNA18-201ENST00000459004 134 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 RPS29P27-201ENST00000463711 170 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 AF186996.7-201ENST00000492781 209 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 AC005178.1-201ENST00000508392 440 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 RNU6-341P-201ENST00000516973 96 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 SNORA74.3-201ENST00000517108 154 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 MTND2P32-201ENST00000521584 1038 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 AC069431.2-201ENST00000604149 1099 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 RBM11P1-201ENST00000604951 799 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 AC010999.1-201ENST00000611856 324 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 AC099654.13-201ENST00000639774 207 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 SNORD14.1-201ENST00000365609 90 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 MIR452-201ENST00000385020 85 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 MIR516B2-201ENST00000385190 85 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 SNORD65B-201ENST00000459126 73 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 RPS3AP17-201ENST00000472594 777 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 RNU6-977P-201ENST00000516411 103 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 MTND1P5-201ENST00000517906 940 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 MIR4764-201ENST00000580680 88 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 AC012433.1-201ENST00000588916 398 ntBASIC-0.24□□□□□ -2.45
TRAV5A0A0B4J249 AC098592.1-201ENST00000419352 333 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 MRPS10P2-201ENST00000431226 381 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 AL606489.2-201ENST00000433886 234 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 Z98949.2-201ENST00000440996 144 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 USP9YP12-201ENST00000450481 570 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 AC097462.1-201ENST00000514125 324 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 Vault.3-201ENST00000516676 95 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 AP003168.1-201ENST00000530091 307 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 AK6P2-201ENST00000549020 471 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 AC120024.3-201ENST00000603167 156 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 AL355073.2-201ENST00000612106 557 ntBASIC-0.25□□□□□ -2.45
TRAV5A0A0B4J249 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 RNU6-83P-201ENST00000384568 112 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 MIR450B-201ENST00000401182 78 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 AC079781.2-201ENST00000446424 169 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 PCNPP5-201ENST00000452246 481 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 RNA5SP94-201ENST00000516917 108 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 RNU2-46P-201ENST00000517038 113 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 IGLVI-20-201ENST00000519296 130 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 MTND1P35-201ENST00000526739 508 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 RPL23AP91-201ENST00000569211 455 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 AP000811.1-201ENST00000603803 651 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 RNU4-5P-201ENST00000607255 135 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 AC091304.9-201ENST00000612091 226 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 AL357075.2-201ENST00000614906 189 ntBASIC-0.26□□□□□ -2.45
TRAV5A0A0B4J249 RNU6-727P-201ENST00000363592 107 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 RNU6-514P-201ENST00000384208 107 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 RNU6-74P-201ENST00000384235 107 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 MIR1298-201ENST00000408783 112 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 MIR1302-7-201ENST00000408841 72 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 MTCO3P19-201ENST00000415864 321 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 GPR143P-201ENST00000434155 205 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 AC105417.1-201ENST00000514691 285 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 SNORA18.7-201ENST00000516910 131 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 MTCO3P23-201ENST00000561363 289 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 MIR4703-201ENST00000577728 79 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 FGF7P1-201ENST00000582820 288 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 AC091178.2-201ENST00000584401 117 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 AC018714.1-201ENST00000605028 208 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 uc_338.16-201ENST00000621804 95 ntBASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.27□□□□□ -2.45
TRAV5A0A0B4J249 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 RNU6-376P-201ENST00000384731 106 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 AL590632.1-201ENST00000424289 371 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 AC015818.7-201ENST00000428754 109 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 AC087499.7-201ENST00000441958 109 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 AC107401.1-201ENST00000503426 685 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 AC091951.3-201ENST00000504093 246 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 AC114811.1-201ENST00000507207 168 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 SNORD27.1-201ENST00000516319 72 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 SNORA40.12-201ENST00000516329 111 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 AC022878.1-201ENST00000530684 149 ntBASIC-0.28□□□□□ -2.45
TRAV5A0A0B4J249 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms