Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 FRG2DP-202ENST00000566967 323 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 MIR5692C1-201ENST00000585309 91 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 AL603755.1-201ENST00000619504 163 ntBASIC0.51□□□□□ -2.33
USH1CQ9Y6N9 CASC19-280ENST00000642102 1351 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 SNORD87-201ENST00000364849 89 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 RNU5A-6P-201ENST00000384136 116 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 MIR1185-2-201ENST00000408687 86 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 RNU6-325P-201ENST00000411132 105 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 AL663109.1-201ENST00000411498 844 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 MTCO1P20-201ENST00000425366 358 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 AL035398.1-201ENST00000430869 322 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 FABP5P4-201ENST00000437203 171 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 NDUFB4P10-201ENST00000452541 359 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 TPTE2P5-203ENST00000458118 728 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 RPL23AP75-201ENST00000491601 451 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 AC022493.2-201ENST00000506122 481 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 AL357078.3-201ENST00000607528 618 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 AC017083.3-201ENST00000609955 700 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 MIR8076-201ENST00000611401 83 ntBASIC0.5□□□□□ -2.33
USH1CQ9Y6N9 Y_RNA.265-201ENST00000364677 108 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 RNU6-245P-201ENST00000384020 107 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 RNU6-38P-201ENST00000384085 107 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 RNU6-424P-201ENST00000384367 105 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 RNY3P9-201ENST00000384727 106 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 U8.16-201ENST00000391279 133 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 AL359672.1-201ENST00000442302 409 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 AL049830.1-201ENST00000468034 425 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 SNORA40.12-201ENST00000516329 111 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 RNA5SP54-201ENST00000516951 92 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 MIR4528-201ENST00000577763 90 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 MIR4438-201ENST00000585271 93 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 AC012557.2-201ENST00000605919 418 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 AL354950.2-201ENST00000617939 290 ntBASIC0.49□□□□□ -2.33
USH1CQ9Y6N9 SNORD50.1-201ENST00000362987 71 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 U3.8-201ENST00000363675 217 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 Y_RNA.378-201ENST00000365652 113 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 RNY1P4-201ENST00000384595 115 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 MTND1P27-201ENST00000451117 902 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 AC079354.2-201ENST00000453523 154 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 LINC01399-202ENST00000458450 244 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 AC091133.4-201ENST00000511142 308 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 RNU6-1038P-201ENST00000516516 104 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 AC100830.2-201ENST00000581636 240 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 AC040904.1-201ENST00000590850 223 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 AC092747.3-201ENST00000603769 301 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 PRELID3BP2-201ENST00000605362 201 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 FAM157A-202ENST00000615155 405 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 AC007742.2-201ENST00000618226 398 ntBASIC0.48□□□□□ -2.33
USH1CQ9Y6N9 RNU4-20P-201ENST00000365601 151 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 AL606489.2-201ENST00000433886 234 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 MTCO2P16-201ENST00000436962 677 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 AC104332.1-201ENST00000440471 797 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 AC245047.8-201ENST00000456455 284 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 MTND3P7-201ENST00000474435 343 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 RNU7-12P-201ENST00000516030 62 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 SNORA25.14-201ENST00000516481 132 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 RNU6-58P-201ENST00000517143 103 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 AC027419.1-201ENST00000522976 328 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 AL133215.3-201ENST00000609801 448 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 AL121757.2-201ENST00000611223 313 ntBASIC0.47□□□□□ -2.33
USH1CQ9Y6N9 Y_RNA.100-201ENST00000363141 102 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 RNU6-727P-201ENST00000363592 107 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 Y_RNA.381-201ENST00000365666 102 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 SNORA75-201ENST00000384158 137 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 RNU6-933P-201ENST00000384424 107 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 MRPS10P2-201ENST00000431226 381 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 USP9YP29-201ENST00000445112 563 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 MTCO2P7-201ENST00000446518 666 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 snoU13.25-201ENST00000458945 104 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 AC023157.2-201ENST00000540596 141 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 AL512605.2-201ENST00000592972 256 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 AC009229.3-201ENST00000608056 282 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 MIR6079-201ENST00000635807 62 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
USH1CQ9Y6N9 SNORD114-23-201ENST00000363536 72 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 SNORD115-32-201ENST00000364079 82 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 MIR10B-201ENST00000385011 110 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 MIR514A2-201ENST00000385131 88 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 MIR514A3-201ENST00000385132 88 ntBASIC0.45□□□□□ -2.34
USH1CQ9Y6N9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms