Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 RPS4XP11-201ENST00000446897 772 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 AC091021.1-201ENST00000468051 388 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 UBE2DNL-203ENST00000474922 222 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 TRBVA-201ENST00000498804 316 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 AC018710.1-201ENST00000506509 158 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 AC116337.1-201ENST00000509680 687 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 AC093303.1-201ENST00000514549 295 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 ACA59.1-201ENST00000515966 143 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU6-1198P-201ENST00000516904 67 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 AC124303.1-201ENST00000605703 360 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 AL357075.2-201ENST00000614906 189 ntBASIC0.62□□□□□ -2.31
TRAPPC1Q9Y5R8 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC008163.1-202ENST00000636004 2889 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 MIRLET7C-201ENST00000362160 84 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 SNORA1B-201ENST00000362535 133 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU6-1266P-201ENST00000362794 105 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 Y_RNA.267-201ENST00000364679 109 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 SNORD116-11-201ENST00000383882 92 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 Y_RNA.414-201ENST00000384011 101 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU6-281P-201ENST00000384212 103 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC006461.1-201ENST00000412637 326 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 MTND3P23-201ENST00000431980 347 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC104332.1-201ENST00000440471 797 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC097462.1-201ENST00000514125 324 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 SNORA31.4-201ENST00000516049 129 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU6-1088P-201ENST00000516850 104 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU7-172P-201ENST00000517125 64 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC090049.2-201ENST00000550377 109 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AL121579.1-201ENST00000555129 305 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC091178.2-201ENST00000584401 117 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC025811.1-201ENST00000604312 472 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC010999.1-201ENST00000611856 324 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC090617.10-201ENST00000624308 134 ntBASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAPPC1Q9Y5R8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 Y_RNA.184-201ENST00000363884 108 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU6-280P-201ENST00000364145 104 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU4-75P-201ENST00000364621 146 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 Y_RNA.265-201ENST00000364677 108 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU6-842P-201ENST00000384269 107 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 Y_RNA.530-201ENST00000384587 101 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU6-1001P-201ENST00000411265 100 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AC010598.1-201ENST00000510378 103 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU6-1291P-201ENST00000516591 104 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU6-197P-201ENST00000516680 100 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 MTND2P38-201ENST00000522536 667 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AP002001.1-203ENST00000534002 267 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 APOOP3-201ENST00000536787 586 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AC245008.1-201ENST00000608123 476 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AC103591.3-201ENST00000608684 209 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AL096861.1-201ENST00000610899 123 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 AC012676.2-201ENST00000619258 186 ntBASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAPPC1Q9Y5R8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 Y_RNA.106-201ENST00000363189 100 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU1-36P-201ENST00000365130 165 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 Y_RNA.473-201ENST00000384333 102 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 MIR526A1-201ENST00000384897 85 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 MIR100-201ENST00000385259 80 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 SNORA75.2-201ENST00000391138 150 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 SNORA75.3-201ENST00000391231 150 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 ELOCP21-201ENST00000412558 336 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 CYCSP49-201ENST00000420810 319 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 USP9YP30-201ENST00000430729 455 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 MTCO2P7-201ENST00000446518 666 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 MTND1P29-201ENST00000448112 647 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 AC009474.2-201ENST00000451383 136 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU7-94P-201ENST00000459576 63 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 AC005840.1-201ENST00000498412 377 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 RNU7-12P-201ENST00000516030 62 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 AC134698.4-201ENST00000523451 826 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 AC125232.2-201ENST00000592457 143 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 AL162424.1-201ENST00000602325 221 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 AC211469.2-201ENST00000605461 205 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 AL512598.1-201ENST00000610158 273 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 MIR1321-201ENST00000637766 79 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 MIR6866-201ENST00000638146 69 ntBASIC0.59□□□□□ -2.31
TRAPPC1Q9Y5R8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAPPC1Q9Y5R8 RNU6-595P-201ENST00000363944 107 ntBASIC0.58□□□□□ -2.32
TRAPPC1Q9Y5R8 RNU6-407P-201ENST00000365280 104 ntBASIC0.58□□□□□ -2.32
TRAPPC1Q9Y5R8 RNU6-831P-201ENST00000384548 107 ntBASIC0.58□□□□□ -2.32
TRAPPC1Q9Y5R8 RNU6-136P-201ENST00000384663 107 ntBASIC0.58□□□□□ -2.32
TRAPPC1Q9Y5R8 AL121890.1-201ENST00000435457 205 ntBASIC0.58□□□□□ -2.32
TRAPPC1Q9Y5R8 Z98949.2-201ENST00000440996 144 ntBASIC0.58□□□□□ -2.32
TRAPPC1Q9Y5R8 U8.22-201ENST00000459141 133 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms