Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC022513.1-201ENST00000624512 117 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 AC064859.1-201ENST00000624741 174 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 MTND4P1-201ENST00000457501 1466 ntBASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.455-201ENST00000384230 98 ntBASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 AL117342.1-201ENST00000404861 406 ntBASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 AC018634.1-201ENST00000437554 401 ntBASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 AC069257.2-201ENST00000441819 155 ntBASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 SNORD65B-201ENST00000459126 73 ntBASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 AP002001.1-203ENST00000534002 267 ntBASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 MIR5094-201ENST00000578766 85 ntBASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 AC040896.1-201ENST00000613819 479 ntBASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 AC091932.3-201ENST00000624223 323 ntBASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU6-417P-201ENST00000384712 107 ntBASIC2.63□□□□□ -1.99
COL4A3BPQ9Y5P4 MIR17-201ENST00000385012 84 ntBASIC2.63□□□□□ -1.99
COL4A3BPQ9Y5P4 MIR1252-201ENST00000408861 65 ntBASIC2.63□□□□□ -1.99
COL4A3BPQ9Y5P4 AC005002.2-201ENST00000438228 269 ntBASIC2.63□□□□□ -1.99
COL4A3BPQ9Y5P4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.63□□□□□ -1.99
COL4A3BPQ9Y5P4 AC024995.1-201ENST00000523014 93 ntBASIC2.63□□□□□ -1.99
COL4A3BPQ9Y5P4 AP003072.1-201ENST00000531740 145 ntBASIC2.63□□□□□ -1.99
COL4A3BPQ9Y5P4 MIR3945-201ENST00000581853 98 ntBASIC2.63□□□□□ -1.99
COL4A3BPQ9Y5P4 AC008749.1-201ENST00000597650 306 ntBASIC2.63□□□□□ -1.99
COL4A3BPQ9Y5P4 CENPCP1-201ENST00000533085 2578 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 RNA5SP276-201ENST00000362580 94 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.152-201ENST00000363578 100 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.287-201ENST00000364853 94 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 RNA5SP323-201ENST00000391094 133 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 RNA5SP212-201ENST00000391223 107 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU2-54P-201ENST00000410299 190 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 AC010154.1-201ENST00000425857 269 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 AC099677.2-201ENST00000436385 175 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 TRBV12-1-201ENST00000479785 344 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 RNVU1-2-201ENST00000516326 135 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 MIR4680-201ENST00000580906 66 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 AC006504.6-201ENST00000590142 199 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 AC005034.5-201ENST00000604219 466 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 AL359075.3-201ENST00000613288 217 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 U6.115-201ENST00000636045 103 ntBASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL4A3BPQ9Y5P4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU6-454P-201ENST00000364292 107 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU6-450P-201ENST00000364654 107 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU11-5P-201ENST00000391216 129 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 AL590004.1-201ENST00000405321 300 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 SNORA3.2-201ENST00000408221 125 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 RNA5SP57-201ENST00000459463 123 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU2-12P-201ENST00000517216 168 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 AC121758.2-201ENST00000553271 193 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 AL355297.3-201ENST00000604082 446 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 AL137847.3-201ENST00000611521 109 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 MTND5P6-201ENST00000422338 1798 ntBASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL4A3BPQ9Y5P4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 SNORD114-7-201ENST00000362520 77 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.243-201ENST00000364481 109 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 CR769767.1-201ENST00000436337 346 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 RPL23AP3-201ENST00000453844 468 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 RPS27P22-201ENST00000478056 241 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 SNORA70.12-201ENST00000516084 153 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 RNA5SP281-201ENST00000516504 135 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 MIR4423-201ENST00000580922 80 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 AC005828.6-201ENST00000606610 232 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.812-201ENST00000610788 101 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.784-201ENST00000613803 101 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.787-201ENST00000616522 101 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.780-201ENST00000617336 101 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.801-201ENST00000619005 101 ntBASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.6□□□□□ -1.99
COL4A3BPQ9Y5P4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 SNORA20B-201ENST00000384220 132 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 SNORD63-201ENST00000384262 68 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.527-201ENST00000384573 102 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 SNORA8-201ENST00000384574 139 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 Y_RNA.570-201ENST00000384750 101 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 MIR873-201ENST00000401120 77 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 RPL23AP36-201ENST00000413895 458 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 EBAG9P1-201ENST00000418955 543 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 MRPS10P1-201ENST00000448483 130 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 AC005042.3-201ENST00000453230 174 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 RNU1-142P-201ENST00000516682 145 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 SUB1P4-201ENST00000566062 339 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 MIR5007-201ENST00000583098 95 ntBASIC2.59□□□□□ -1.99
COL4A3BPQ9Y5P4 MIR4438-201ENST00000585271 93 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms