Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNU11-5P-201ENST00000391216 129 ntBASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 RNA5SP508-201ENST00000411327 119 ntBASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 AL139109.1-201ENST00000455491 297 ntBASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 RPS27AP9-201ENST00000477681 438 ntBASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 Y_RNA.668-201ENST00000516233 93 ntBASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 RNU6-1338P-201ENST00000516328 91 ntBASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 AC062037.2-201ENST00000610137 73 ntBASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 AC010615.1-201ENST00000594254 1764 ntBASIC2.61□□□□□ -1.99
PCDHGA9Q9Y5G4 MIR340-201ENST00000362125 95 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 RNU6-472P-201ENST00000384299 107 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 MIR215-201ENST00000384858 110 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 MIR873-201ENST00000401120 77 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 RNA5SP21-201ENST00000410917 96 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 RNA5SP270-201ENST00000411361 118 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 SNORD65B-201ENST00000459126 73 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 RNU6-436P-201ENST00000516171 114 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 AL137100.2-201ENST00000555786 315 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 AL353149.1-201ENST00000610667 244 ntBASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHGA9Q9Y5G4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 RNU1-58P-201ENST00000362413 163 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 RNU6-23P-201ENST00000363283 107 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 Y_RNA.361-201ENST00000365515 120 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 Y_RNA.396-201ENST00000383949 103 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 RNU1-52P-201ENST00000384190 164 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 Y_RNA.541-201ENST00000384640 113 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 MIR515-2-201ENST00000384883 83 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 MIR515-1-201ENST00000384884 83 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 MT-TW-201ENST00000387382 68 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 AL031003.1-201ENST00000404229 172 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 RNU2-52P-201ENST00000410680 190 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 AL513328.1-201ENST00000446460 224 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 AC011406.1-201ENST00000512440 370 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 MIR6715A-201ENST00000615929 79 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 FO624990.1-201ENST00000636373 85 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 CENPCP1-201ENST00000533085 2578 ntBASIC2.59□□□□□ -1.99
PCDHGA9Q9Y5G4 SNORA25.1-201ENST00000362326 128 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 RNA5SP493-201ENST00000364115 91 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.286-201ENST00000364813 102 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 SNORA20B-201ENST00000384220 132 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 RNU6-102P-201ENST00000384485 104 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 MIR548H3-201ENST00000408771 118 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 SNORD127-201ENST00000458892 86 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 SERF1AP1-201ENST00000514575 187 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 AC023157.2-201ENST00000540596 141 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 AC091544.4-201ENST00000555268 342 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 AC078899.2-201ENST00000595282 212 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.15-201ENST00000611544 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.16-201ENST00000613119 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.12-201ENST00000613778 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.20-201ENST00000613956 192 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.9-201ENST00000615427 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.11-201ENST00000616345 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.2-201ENST00000616535 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.3-201ENST00000617785 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.19-201ENST00000618602 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 RNU2-1-201ENST00000618664 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.6-201ENST00000619225 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.5-201ENST00000619465 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 U2.10-201ENST00000620268 191 ntBASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
PCDHGA9Q9Y5G4 MTND5P6-201ENST00000422338 1798 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 SNORA27.1-201ENST00000362604 124 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 RNU1-35P-201ENST00000362782 153 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.329-201ENST00000365209 107 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.478-201ENST00000384358 107 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 Y_RNA.483-201ENST00000384380 101 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 MIR181A2-201ENST00000384863 110 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 RNA5SP465-201ENST00000391195 109 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 AC060773.1-201ENST00000421698 310 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 RNU6-1132P-201ENST00000459214 107 ntBASIC2.57□□□□□ -2
PCDHGA9Q9Y5G4 RPL39P38-201ENST00000467018 153 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms