Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RNA5SP475-201ENST00000410568 110 ntBASIC2.11□□□□□ -2.07
PCDHGB3Q9Y5G1 RNU2-7P-201ENST00000410794 178 ntBASIC2.11□□□□□ -2.07
PCDHGB3Q9Y5G1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHGB3Q9Y5G1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDHGB3Q9Y5G1 HMGN1P13-201ENST00000505795 138 ntBASIC2.11□□□□□ -2.07
PCDHGB3Q9Y5G1 RNU1-142P-201ENST00000516682 145 ntBASIC2.11□□□□□ -2.07
PCDHGB3Q9Y5G1 GNAI2P1-201ENST00000541815 315 ntBASIC2.11□□□□□ -2.07
PCDHGB3Q9Y5G1 AC084364.2-201ENST00000546924 395 ntBASIC2.11□□□□□ -2.07
PCDHGB3Q9Y5G1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 SNORD114-7-201ENST00000362520 77 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 Y_RNA.27-201ENST00000362540 103 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 Y_RNA.287-201ENST00000364853 94 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 RNU6-417P-201ENST00000384712 107 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 Y_RNA.604-201ENST00000410574 102 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 ELOCP21-201ENST00000412558 336 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 AC245047.4-201ENST00000433189 144 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 RPL23AP42-201ENST00000471152 471 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 AC010409.1-201ENST00000487382 476 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 Y_RNA.661-201ENST00000516003 99 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 IGKV3-31-201ENST00000523109 329 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 AC104984.5-201ENST00000586878 94 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 MIR3674-201ENST00000636576 68 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 WWP1P1-201ENST00000466609 2769 ntBASIC2.1□□□□□ -2.07
PCDHGB3Q9Y5G1 RNU6-271P-201ENST00000363858 105 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 Y_RNA.197-201ENST00000364004 102 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 Y_RNA.460-201ENST00000384255 102 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 Y_RNA.526-201ENST00000384572 110 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 RNA5SP489-201ENST00000410986 109 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 RAB28P5-201ENST00000427490 651 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 RNU7-94P-201ENST00000459576 63 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 UBL5P3-201ENST00000475112 231 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 HMGB3P17-201ENST00000504195 649 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 AC025465.3-201ENST00000510570 311 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 RNA5SP200-201ENST00000516360 103 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 RNA5SP281-201ENST00000516504 135 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 SNORA31.17-201ENST00000516953 127 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 AC006600.1-201ENST00000572529 153 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 AL357075.2-201ENST00000614906 189 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 AC104985.2-201ENST00000620598 500 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
PCDHGB3Q9Y5G1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PCDHGB3Q9Y5G1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 MIR30A-201ENST00000385092 71 ntBASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 Y_RNA.579-201ENST00000390939 94 ntBASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 MRPL35P1-201ENST00000404272 572 ntBASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 MIR1261-201ENST00000408659 82 ntBASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 AC027575.1-201ENST00000481064 460 ntBASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 AC103810.8-201ENST00000607347 118 ntBASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 U6.73-201ENST00000619194 103 ntBASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 AC091925.1-201ENST00000623204 462 ntBASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 MIR4272-201ENST00000635924 64 ntBASIC2.08□□□□□ -2.08
PCDHGB3Q9Y5G1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 SNORD65B-201ENST00000459126 73 ntBASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 snoU13.15-201ENST00000459407 104 ntBASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 RPS26P45-201ENST00000471748 340 ntBASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 AC008834.1-201ENST00000511612 175 ntBASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 RNU7-99P-201ENST00000516271 62 ntBASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 C8orf59P2-201ENST00000603441 271 ntBASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 AL080274.1-201ENST00000605565 220 ntBASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 MIR6715A-201ENST00000615929 79 ntBASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 AC090971.5-201ENST00000621102 293 ntBASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.07□□□□□ -2.08
PCDHGB3Q9Y5G1 RNU6-414P-201ENST00000363705 104 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 Y_RNA.509-201ENST00000384506 99 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 MIR562-201ENST00000384894 95 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 SDAD1P3-201ENST00000427380 333 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 RPS29P21-201ENST00000496272 170 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 SNORA40.14-201ENST00000516543 86 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 AC092447.9-201ENST00000603395 144 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 MIR8074-201ENST00000615081 81 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 AC090574.1-201ENST00000623186 233 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 AC138305.3-201ENST00000624988 240 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 MTND4P1-201ENST00000457501 1466 ntBASIC2.06□□□□□ -2.08
PCDHGB3Q9Y5G1 AL356292.1-201ENST00000283110 373 ntBASIC2.05□□□□□ -2.08
PCDHGB3Q9Y5G1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCDHGB3Q9Y5G1 Y_RNA.112-201ENST00000363250 102 ntBASIC2.05□□□□□ -2.08
PCDHGB3Q9Y5G1 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
PCDHGB3Q9Y5G1 AC018865.2-201ENST00000423631 129 ntBASIC2.05□□□□□ -2.08
PCDHGB3Q9Y5G1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHGB3Q9Y5G1 snoU13.26-201ENST00000459452 105 ntBASIC2.05□□□□□ -2.08
PCDHGB3Q9Y5G1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.05□□□□□ -2.08
PCDHGB3Q9Y5G1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms