Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.03□□□□□ -2.24
SHANK1Q9Y566 AL590632.1-201ENST00000424289 371 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.03□□□□□ -2.24
SHANK1Q9Y566 MTND4P18-201ENST00000447010 465 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 RPS29P23-201ENST00000458635 123 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 RNU7-152P-201ENST00000458982 64 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 AC010531.2-201ENST00000465012 153 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 MRPS17P9-201ENST00000511924 393 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 AL590705.4-201ENST00000532209 134 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 APOOP3-201ENST00000536787 586 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 AC026470.2-201ENST00000561492 181 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 AC018462.2-201ENST00000605375 395 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 AC103810.8-201ENST00000607347 118 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 AC022202.1-201ENST00000613515 211 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 AL590240.4-201ENST00000616908 390 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 AC068205.3-201ENST00000636385 468 ntBASIC1.03□□□□□ -2.24
SHANK1Q9Y566 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SHANK1Q9Y566 RNY1P16-201ENST00000363063 111 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.303-201ENST00000364998 94 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 MT-TD-201ENST00000387419 68 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
SHANK1Q9Y566 RNU1-139P-201ENST00000391307 165 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 AL158823.1-201ENST00000418441 478 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 AC060773.1-201ENST00000421698 310 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 EIF1P2-201ENST00000428233 350 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 AC098934.3-201ENST00000430450 190 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 AL353997.1-201ENST00000432936 108 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 HMGN2P34-201ENST00000437647 269 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 AC098614.3-201ENST00000438957 440 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.03□□□□□ -2.25
SHANK1Q9Y566 AC107399.1-201ENST00000451226 265 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 RNU6-470P-201ENST00000515954 104 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.03□□□□□ -2.25
SHANK1Q9Y566 AL355802.3-201ENST00000607571 545 ntBASIC1.03□□□□□ -2.25
SHANK1Q9Y566 SNORD115-3-201ENST00000363100 82 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 RNU4-73P-201ENST00000363164 141 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 RNU6-99P-201ENST00000364721 107 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 SNORA67.2-201ENST00000384300 149 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 MIR150-201ENST00000385048 84 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 MIR153-2-201ENST00000385225 87 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 SNORA12.2-201ENST00000391040 156 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SHANK1Q9Y566 AF228730.4-201ENST00000421457 183 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.02□□□□□ -2.25
SHANK1Q9Y566 AC007215.1-201ENST00000464893 276 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 AC027575.1-201ENST00000481064 460 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 RNU6-1098P-201ENST00000516772 96 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 MIR1273G-201ENST00000577677 100 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 UBE2V2P2-201ENST00000587677 504 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 AC069114.2-201ENST00000604699 304 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 LARP7P1-201ENST00000605576 316 ntBASIC1.02□□□□□ -2.25
SHANK1Q9Y566 SNORD81.2-201ENST00000365153 76 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 SNORA36A-201ENST00000384221 132 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.474-201ENST00000384341 102 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.577-201ENST00000384794 101 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 RNU6-1093P-201ENST00000391194 107 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 MTCYBP4-201ENST00000401524 249 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 RNA5SP494-201ENST00000410653 129 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC139712.2-201ENST00000424302 339 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC099799.1-201ENST00000439809 192 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 UBE2V1P7-201ENST00000446395 340 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 RNU1-98P-201ENST00000458992 160 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.653-201ENST00000459091 95 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC010409.1-201ENST00000487382 476 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 RNU6-307P-201ENST00000516743 106 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC091144.1-201ENST00000519573 138 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC134698.4-201ENST00000523451 826 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC025253.1-201ENST00000613623 543 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AL773524.1-201ENST00000614065 229 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC022513.1-201ENST00000624512 117 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC073544.1-201ENST00000600110 1595 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 RNU6-727P-201ENST00000363592 107 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.184-201ENST00000363884 108 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.274-201ENST00000364714 101 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 SNORA8-201ENST00000384574 139 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 RNY4P36-201ENST00000391116 96 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 MIR548K-201ENST00000408406 116 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.01□□□□□ -2.25
SHANK1Q9Y566 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC145146.1-201ENST00000496370 254 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC093303.1-201ENST00000514549 295 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 Y_RNA.708-201ENST00000516950 96 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 MIR3169-201ENST00000578032 83 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 AC112487.2-201ENST00000637950 304 ntBASIC1.01□□□□□ -2.25
SHANK1Q9Y566 RNU6-1305P-201ENST00000364353 104 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 RNU6-716P-201ENST00000365621 103 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 MIR549A-201ENST00000385268 96 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 SNORA69.1-201ENST00000390904 137 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 HMGN2P39-201ENST00000398005 273 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 AC123900.1-201ENST00000420390 96 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 RPL23AP3-201ENST00000453844 468 ntBASIC1□□□□□ -2.25
SHANK1Q9Y566 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1□□□□□ -2.25
SHANK1Q9Y566 RNU2-34P-201ENST00000516534 121 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms