Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RNU6-21P-201ENST00000384710 107 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 MIR221-201ENST00000385135 110 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 SNORD115-46-201ENST00000390982 71 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 RNU6-121P-201ENST00000410525 99 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 RN7SKP284-201ENST00000411002 343 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 RNA5SP508-201ENST00000411327 119 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 MTCYBP9-201ENST00000431021 303 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 IPO7P1-201ENST00000442031 636 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 AP003733.2-201ENST00000529409 171 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.23□□□□□ -2.05
PKP3Q9Y446 AL031274.2-201ENST00000599419 203 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 AC022202.1-201ENST00000613515 211 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 AC009831.4-201ENST00000620744 325 ntBASIC2.23□□□□□ -2.05
PKP3Q9Y446 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PKP3Q9Y446 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PKP3Q9Y446 Y_RNA.26-201ENST00000362539 101 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 SNORD115-3-201ENST00000363100 82 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 SNORA3A-201ENST00000364113 130 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.22□□□□□ -2.05
PKP3Q9Y446 Y_RNA.512-201ENST00000384518 102 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 RNU6-160P-201ENST00000384591 107 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 MIR1302-3-201ENST00000408128 138 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 AL135786.1-201ENST00000415892 214 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 SNORA59A-201ENST00000459326 152 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 RNU6-221P-201ENST00000459541 99 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.22□□□□□ -2.05
PKP3Q9Y446 RNA5SP137-201ENST00000516833 135 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.22□□□□□ -2.05
PKP3Q9Y446 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.22□□□□□ -2.05
PKP3Q9Y446 MYL12BP1-201ENST00000569826 507 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.22□□□□□ -2.05
PKP3Q9Y446 AC006380.1-201ENST00000603598 186 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.22□□□□□ -2.05
PKP3Q9Y446 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
PKP3Q9Y446 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PKP3Q9Y446 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PKP3Q9Y446 MIR340-201ENST00000362125 95 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 RNU6-1266P-201ENST00000362794 105 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 Y_RNA.101-201ENST00000363154 102 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 SNORD113-8-201ENST00000363497 74 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 MIR29C-201ENST00000385231 88 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 Y_RNA.602-201ENST00000410535 92 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 RPL23AP36-201ENST00000413895 458 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.21□□□□□ -2.06
PKP3Q9Y446 RPL21P38-201ENST00000418090 167 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 AC008134.1-201ENST00000420943 193 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 AL356320.1-201ENST00000429616 163 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 AC008413.1-201ENST00000511864 177 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 RNU6-155P-201ENST00000516347 100 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 RNU6-856P-201ENST00000516959 98 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 AC087441.2-201ENST00000529141 262 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.21□□□□□ -2.06
PKP3Q9Y446 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.21□□□□□ -2.06
PKP3Q9Y446 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 AC022441.3-201ENST00000605737 136 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 SNORD113-5-201ENST00000607261 78 ntBASIC2.21□□□□□ -2.06
PKP3Q9Y446 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.21□□□□□ -2.06
PKP3Q9Y446 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.21□□□□□ -2.06
PKP3Q9Y446 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PKP3Q9Y446 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PKP3Q9Y446 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PKP3Q9Y446 Y_RNA.222-201ENST00000364264 102 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 RNU6-454P-201ENST00000364292 107 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 Y_RNA.331-201ENST00000365267 102 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 Y_RNA.446-201ENST00000384178 104 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 RNU4-30P-201ENST00000410245 143 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 RNU2-54P-201ENST00000410299 190 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.2□□□□□ -2.06
PKP3Q9Y446 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.2□□□□□ -2.06
PKP3Q9Y446 AC005042.3-201ENST00000453230 174 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 SEPT14P8-201ENST00000508026 178 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 RNA5SP82-201ENST00000516707 92 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 MIR3684-201ENST00000579779 74 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
PKP3Q9Y446 AL590808.1-201ENST00000618696 141 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 MIR8062-201ENST00000621515 85 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 AC006001.4-201ENST00000622243 395 ntBASIC2.2□□□□□ -2.06
PKP3Q9Y446 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PKP3Q9Y446 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PKP3Q9Y446 Y_RNA.144-201ENST00000363521 113 ntBASIC2.19□□□□□ -2.06
PKP3Q9Y446 RNU6-196P-201ENST00000384315 107 ntBASIC2.19□□□□□ -2.06
PKP3Q9Y446 Y_RNA.581-201ENST00000391017 97 ntBASIC2.19□□□□□ -2.06
PKP3Q9Y446 SNORA48.3-201ENST00000391081 134 ntBASIC2.19□□□□□ -2.06
PKP3Q9Y446 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.19□□□□□ -2.06
PKP3Q9Y446 RNU1-131P-201ENST00000458943 161 ntBASIC2.19□□□□□ -2.06
PKP3Q9Y446 AC098869.1-201ENST00000481627 292 ntBASIC2.19□□□□□ -2.06
PKP3Q9Y446 RNU2-12P-201ENST00000517216 168 ntBASIC2.19□□□□□ -2.06
PKP3Q9Y446 AC025647.1-201ENST00000517879 253 ntBASIC2.19□□□□□ -2.06
PKP3Q9Y446 AC012640.5-201ENST00000623897 319 ntBASIC2.19□□□□□ -2.06
PKP3Q9Y446 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
PKP3Q9Y446 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PKP3Q9Y446 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.18□□□□□ -2.06
PKP3Q9Y446 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PKP3Q9Y446 RNU4-90P-201ENST00000362773 141 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 MIR568-201ENST00000385036 95 ntBASIC2.18□□□□□ -2.06
PKP3Q9Y446 SNORA11.4-201ENST00000408823 129 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms