Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-653P-201ENST00000363074 106 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 RNU4-80P-201ENST00000363200 141 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-1180P-201ENST00000364935 107 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 SNORA51.4-201ENST00000364993 124 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 RNA5SP425-201ENST00000410336 112 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 RN7SKP51-201ENST00000410781 304 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 AC140059.1-201ENST00000489238 361 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 AC005828.6-201ENST00000606610 232 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 PCGEM1.1-201ENST00000613431 131 ntBASIC3.13□□□□□ -1.91
PTPN22Q9Y2R2 RNA5SP289-201ENST00000362332 137 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-1272P-201ENST00000362776 107 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RNA5SP240-201ENST00000365355 128 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-1264P-201ENST00000383891 107 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-211P-201ENST00000384047 107 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 SNORA40.19-201ENST00000390846 128 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RNU4-53P-201ENST00000410828 140 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 EIF4EP4-201ENST00000424916 578 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 AIMP1P2-201ENST00000425294 312 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 AC009237.7-201ENST00000447357 229 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RPS27AP9-201ENST00000477681 438 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-344P-201ENST00000516635 111 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RNU2-12P-201ENST00000517216 168 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 AP002001.1-203ENST00000534002 267 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 MIR3144-201ENST00000579460 79 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 MIR3117-201ENST00000584034 78 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RPL30P11-203ENST00000598995 310 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 AL365265.1-201ENST00000621045 234 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 snoU18.1-201ENST00000629629 71 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 AL161431.1-201ENST00000618966 4205 ntBASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPN22Q9Y2R2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 RNA5SP99-201ENST00000364020 114 ntBASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-704P-201ENST00000364162 103 ntBASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-923P-201ENST00000364753 107 ntBASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 RPL30P4-201ENST00000429309 333 ntBASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 AC080013.2-201ENST00000460866 323 ntBASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 AC103975.1-201ENST00000482506 483 ntBASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-1219P-201ENST00000516143 112 ntBASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-155P-201ENST00000516347 100 ntBASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 MIR5739-201ENST00000619803 80 ntBASIC3.11□□□□□ -1.91
PTPN22Q9Y2R2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 Y_RNA.40-201ENST00000362645 93 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-461P-201ENST00000364195 107 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 SNORD56.5-201ENST00000364281 72 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 Y_RNA.308-201ENST00000365043 101 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 RNA5SP475-201ENST00000410568 110 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-1135P-201ENST00000411083 103 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 AL451074.5-201ENST00000415894 435 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 CYP2C59P-201ENST00000457790 269 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 RNY3P16-201ENST00000516338 101 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 EIF4A1P12-201ENST00000551910 141 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 AL356280.1-201ENST00000603614 379 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 AL078604.3-201ENST00000615580 211 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 AC090517.3-201ENST00000625170 141 ntBASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPN22Q9Y2R2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 MIR512-1-201ENST00000384913 84 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 Y_RNA.580-201ENST00000391004 95 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 AL357139.1-201ENST00000407792 426 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 RN7SKP223-201ENST00000410582 62 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 RNU2-63P-201ENST00000410792 194 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 AC104332.2-201ENST00000429959 156 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 UBBP3-201ENST00000445497 241 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 DEFB117-201ENST00000602356 141 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 AC006380.1-201ENST00000603598 186 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 TCL6_2.1-201ENST00000615162 119 ntBASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN22Q9Y2R2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
PTPN22Q9Y2R2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 RNU4-15P-201ENST00000362613 141 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 Y_RNA.291-201ENST00000364886 113 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 RNU6-804P-201ENST00000384286 107 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 MIR29B2-201ENST00000385055 81 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 MIR549A-201ENST00000385268 96 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 AL135786.1-201ENST00000415892 214 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 AC024067.1-201ENST00000426199 223 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 AC092427.1-202ENST00000430569 476 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 SUMO2P18-201ENST00000518873 252 ntBASIC3.08□□□□□ -1.92
PTPN22Q9Y2R2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 321.7 ms