Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 Y_RNA.295-201ENST00000364918 102 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 Y_RNA.450-201ENST00000384198 113 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 RNU6-831P-201ENST00000384548 107 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 RNU6-950P-201ENST00000384651 107 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 AC243428.1-201ENST00000421099 264 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 MTND4LP16-201ENST00000440828 295 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 RPL31P58-201ENST00000469001 379 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 RNU6-107P-201ENST00000516643 102 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 AC134698.4-201ENST00000523451 826 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 AL512310.8-201ENST00000550183 120 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 AL137100.2-201ENST00000555786 315 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 MIR6128-201ENST00000615528 109 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.16□□□□□ -2.22
NPIPA1Q9UND3 RNA5SP327-201ENST00000362494 101 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 MIR518E-201ENST00000385252 88 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 RN7SKP200-201ENST00000410564 320 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 RNU6-1148P-201ENST00000410992 104 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 AC245047.3-201ENST00000429428 127 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 RNU1-54P-201ENST00000517181 120 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 AL590705.4-201ENST00000532209 134 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 MIR3660-201ENST00000584845 100 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 AC093913.1-201ENST00000614178 329 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 MIR8054-201ENST00000620877 86 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 MIR3662-201ENST00000637030 95 ntBASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NPIPA1Q9UND3 Y_RNA.3-201ENST00000362331 103 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 RNU6-623P-201ENST00000363143 105 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 RNU5F-3P-201ENST00000363767 117 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 RNU6-1013P-201ENST00000384180 107 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 Y_RNA.573-201ENST00000384763 105 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 MIR10B-201ENST00000385011 110 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 RNU6-440P-201ENST00000390882 105 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AL356776.1-201ENST00000406574 447 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 USP9YP30-201ENST00000430729 455 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 MTND4P18-201ENST00000447010 465 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 NDUFB4P10-201ENST00000452541 359 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 RNU6-566P-201ENST00000516790 107 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 MIR4452-201ENST00000583004 71 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AC022432.1-201ENST00000595739 310 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AC073413.2-201ENST00000604332 360 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AC080078.3-201ENST00000605407 463 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AL355802.3-201ENST00000607571 545 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AL021879.1-201ENST00000611756 288 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 AC010999.1-201ENST00000611856 324 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 U6.73-201ENST00000619194 103 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 MIR8065-201ENST00000620577 100 ntBASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NPIPA1Q9UND3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 ZNF299P-201ENST00000406845 1804 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 RNU1-22P-201ENST00000363334 158 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 Y_RNA.184-201ENST00000363884 108 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 Y_RNA.318-201ENST00000365131 97 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 Y_RNA.453-201ENST00000384223 109 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 MRPL42P3-201ENST00000401492 326 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 USMG5P1-201ENST00000425964 177 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 COX6CP14-201ENST00000469580 174 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 AC093852.1-201ENST00000503587 266 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 RN7SKP88-201ENST00000516847 250 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 AC091144.1-201ENST00000519573 138 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 APOOP3-201ENST00000536787 586 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 7SK.8-201ENST00000612110 250 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 7SK.11-201ENST00000615477 250 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 7SK.13-201ENST00000622040 250 ntBASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NPIPA1Q9UND3 RNU6-222P-201ENST00000362438 107 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 RNU6-595P-201ENST00000363944 107 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 SNORD114-22-201ENST00000365423 72 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 SNORD115-47-201ENST00000391226 86 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 TOMM22P2-201ENST00000430735 237 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 MTND3P23-201ENST00000431980 347 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 SNORD65B-201ENST00000459126 73 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 RPS27P22-201ENST00000478056 241 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 AC092989.1-201ENST00000481235 277 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 AC105313.1-201ENST00000509121 353 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 AC093303.1-201ENST00000514549 295 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 RNU7-99P-201ENST00000516271 62 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 RNU6-720P-201ENST00000516363 108 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 Y_RNA.706-201ENST00000516933 99 ntBASIC1.12□□□□□ -2.23
NPIPA1Q9UND3 RNU7-128P-201ENST00000517247 62 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms