Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-281P-201ENST00000384212 103 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 RNU6-331P-201ENST00000384724 107 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 MIR10B-201ENST00000385011 110 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 Y_RNA.635-201ENST00000459041 101 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 RPL7P42-201ENST00000481005 679 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 Y_RNA.691-201ENST00000516611 103 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 AC069114.2-201ENST00000604699 304 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 AL353149.1-201ENST00000610667 244 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 AC010615.1-201ENST00000594254 1764 ntBASIC2.85□□□□□ -1.95
SHROOM4Q9ULL8 Y_RNA.106-201ENST00000363189 100 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 RNU6-112P-201ENST00000363599 104 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 RNU6-1240P-201ENST00000365155 104 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 RNU2-40P-201ENST00000410833 196 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 AC008134.1-201ENST00000420943 193 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 CST2P1-201ENST00000425770 87 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 USP9YP16-201ENST00000430287 407 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 AL445305.1-201ENST00000432577 575 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 AC099677.2-201ENST00000436385 175 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 USP9YP23-201ENST00000455085 407 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 RNU6-221P-201ENST00000459541 99 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 AC010409.1-201ENST00000487382 476 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 CYCSP23-201ENST00000519781 313 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 MIR151B-201ENST00000584249 96 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 AC092794.2-201ENST00000620933 563 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 MIR338-201ENST00000636369 67 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 CENPCP1-201ENST00000533085 2578 ntBASIC2.84□□□□□ -1.95
SHROOM4Q9ULL8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 MTND5P16-201ENST00000460269 1703 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 RNU6-727P-201ENST00000363592 107 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 Y_RNA.374-201ENST00000365606 101 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 MIR520A-201ENST00000384862 85 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 AL354695.1-201ENST00000427935 228 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 RBMX2P4-201ENST00000441256 376 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 RPL17P19-201ENST00000489069 552 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 HMGN1P12-201ENST00000499125 195 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 RNU6-1114P-201ENST00000516022 107 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 MIR5701-3-201ENST00000578890 82 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 MIR5695-201ENST00000579717 85 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 MIR5701-1-201ENST00000585138 82 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 AC025253.1-201ENST00000613623 543 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 MIR5701-2-201ENST00000615634 82 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 AC126177.8-201ENST00000618339 1015 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 AC008873.1-201ENST00000625051 138 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 MIR6767-201ENST00000637302 66 ntBASIC2.84□□□□□ -1.96
SHROOM4Q9ULL8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 Y_RNA.364-201ENST00000365532 101 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 MIR548B-201ENST00000385247 97 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 RNU6-360P-201ENST00000390944 104 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 MIR1185-2-201ENST00000408687 86 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 PDCL2P1-201ENST00000419302 352 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 RNU6-1223P-201ENST00000517124 104 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 RNU6-264P-201ENST00000517134 104 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 AC084364.2-201ENST00000546924 395 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 MZT1P2-201ENST00000604387 248 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 AC005014.2-201ENST00000607795 599 ntBASIC2.83□□□□□ -1.96
SHROOM4Q9ULL8 RNU1-22P-201ENST00000363334 158 ntBASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 Y_RNA.404-201ENST00000383978 102 ntBASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 RNU1-139P-201ENST00000391307 165 ntBASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 AC069257.2-201ENST00000441819 155 ntBASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 RNU7-87P-201ENST00000459343 62 ntBASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 SNORA31.17-201ENST00000516953 127 ntBASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 AC105029.1-201ENST00000520250 669 ntBASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 MIR6078-201ENST00000611069 100 ntBASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHROOM4Q9ULL8 Y_RNA.184-201ENST00000363884 108 ntBASIC2.81□□□□□ -1.96
SHROOM4Q9ULL8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.81□□□□□ -1.96
SHROOM4Q9ULL8 SNORA20.3-201ENST00000516880 132 ntBASIC2.81□□□□□ -1.96
SHROOM4Q9ULL8 AC025647.1-201ENST00000517879 253 ntBASIC2.81□□□□□ -1.96
SHROOM4Q9ULL8 AC006001.4-201ENST00000622243 395 ntBASIC2.81□□□□□ -1.96
SHROOM4Q9ULL8 ICE2P2-201ENST00000483823 2787 ntBASIC2.8□□□□□ -1.96
SHROOM4Q9ULL8 SNORD87-201ENST00000364849 89 ntBASIC2.8□□□□□ -1.96
SHROOM4Q9ULL8 MIR515-2-201ENST00000384883 83 ntBASIC2.8□□□□□ -1.96
SHROOM4Q9ULL8 MIR515-1-201ENST00000384884 83 ntBASIC2.8□□□□□ -1.96
SHROOM4Q9ULL8 FTH1P12-201ENST00000432137 551 ntBASIC2.8□□□□□ -1.96
SHROOM4Q9ULL8 AC012493.3-201ENST00000604494 112 ntBASIC2.8□□□□□ -1.96
SHROOM4Q9ULL8 AL355073.2-201ENST00000612106 557 ntBASIC2.8□□□□□ -1.96
SHROOM4Q9ULL8 MIR6515-201ENST00000619843 57 ntBASIC2.8□□□□□ -1.96
SHROOM4Q9ULL8 snoU2-30.2-201ENST00000362805 70 ntBASIC2.79□□□□□ -1.96
SHROOM4Q9ULL8 AL117342.1-201ENST00000404861 406 ntBASIC2.79□□□□□ -1.96
SHROOM4Q9ULL8 Y_RNA.683-201ENST00000516508 93 ntBASIC2.79□□□□□ -1.96
SHROOM4Q9ULL8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.79□□□□□ -1.96
SHROOM4Q9ULL8 AC093023.1-201ENST00000547375 507 ntBASIC2.79□□□□□ -1.96
SHROOM4Q9ULL8 RBM11P1-201ENST00000604951 799 ntBASIC2.79□□□□□ -1.96
SHROOM4Q9ULL8 AC103810.8-201ENST00000607347 118 ntBASIC2.79□□□□□ -1.96
SHROOM4Q9ULL8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.79□□□□□ -1.96
SHROOM4Q9ULL8 SNORA72.2-201ENST00000365028 127 ntBASIC2.78□□□□□ -1.96
SHROOM4Q9ULL8 RNU4-52P-201ENST00000384209 138 ntBASIC2.78□□□□□ -1.96
SHROOM4Q9ULL8 RNU6-417P-201ENST00000384712 107 ntBASIC2.78□□□□□ -1.96
SHROOM4Q9ULL8 AC091179.3-201ENST00000474761 144 ntBASIC2.78□□□□□ -1.96
SHROOM4Q9ULL8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.78□□□□□ -1.96
SHROOM4Q9ULL8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.78□□□□□ -1.96
SHROOM4Q9ULL8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.78□□□□□ -1.96
SHROOM4Q9ULL8 RNU1-92P-201ENST00000517017 135 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms