Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU2-14P-201ENST00000411053 191 ntBASIC3.3□□□□□ -1.88
DDX41Q9UJV9 AL138752.1-201ENST00000452964 351 ntBASIC3.3□□□□□ -1.88
DDX41Q9UJV9 COX6CP14-201ENST00000469580 174 ntBASIC3.3□□□□□ -1.88
DDX41Q9UJV9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX41Q9UJV9 RNU6-182P-201ENST00000516970 105 ntBASIC3.3□□□□□ -1.88
DDX41Q9UJV9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.76-201ENST00000362931 109 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.117-201ENST00000363294 101 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.217-201ENST00000364214 105 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 SNORA40.19-201ENST00000390846 128 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 MIR873-201ENST00000401120 77 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 AL139156.1-201ENST00000412785 841 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 SRIP3-201ENST00000413200 219 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 MTND5P15-201ENST00000434246 349 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 AC105272.1-201ENST00000438604 198 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.29□□□□□ -1.88
DDX41Q9UJV9 AL357134.1-201ENST00000445848 426 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.638-201ENST00000459374 113 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.641-201ENST00000459414 105 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 AC107016.2-201ENST00000547968 190 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 PRELID2P1-201ENST00000552837 301 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 AC130289.1-201ENST00000577321 73 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 AC073349.3-201ENST00000617616 186 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 AP006437.1-201ENST00000641440 3685 ntBASIC3.29□□□□□ -1.88
DDX41Q9UJV9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX41Q9UJV9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 AL159152.1-201ENST00000635019 2587 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 Y_RNA.297-201ENST00000364950 91 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 RNU6-1240P-201ENST00000365155 104 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 RNU2-48P-201ENST00000410694 191 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 RN7SL429P-201ENST00000479090 223 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 RN7SL297P-201ENST00000483161 293 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 RN7SL489P-201ENST00000486185 223 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 RN7SL327P-201ENST00000488659 223 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 AC025647.1-201ENST00000517879 253 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 MIR4282-201ENST00000583613 67 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 RN7SL853P-201ENST00000617250 223 ntBASIC3.28□□□□□ -1.88
DDX41Q9UJV9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
DDX41Q9UJV9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.28□□□□□ -1.89
DDX41Q9UJV9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DDX41Q9UJV9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
DDX41Q9UJV9 Y_RNA.29-201ENST00000362570 113 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 SNORA9.2-201ENST00000365361 133 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 Y_RNA.361-201ENST00000365515 120 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 SNORA20B-201ENST00000384220 132 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 Y_RNA.785-201ENST00000384290 109 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 MIR592-201ENST00000384959 97 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 RNU6-855P-201ENST00000410395 104 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 RNA5SP274-201ENST00000410484 108 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 AC010154.1-201ENST00000425857 269 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.27□□□□□ -1.89
DDX41Q9UJV9 SNORD65B-201ENST00000459126 73 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 RPS27AP9-201ENST00000477681 438 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.27□□□□□ -1.89
DDX41Q9UJV9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.27□□□□□ -1.89
DDX41Q9UJV9 AC136628.3-201ENST00000521868 290 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 AP005660.1-201ENST00000522972 293 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.27□□□□□ -1.89
DDX41Q9UJV9 AC090115.4-201ENST00000609970 188 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 AC006435.5-201ENST00000624486 112 ntBASIC3.27□□□□□ -1.89
DDX41Q9UJV9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
DDX41Q9UJV9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
DDX41Q9UJV9 MIR449A-201ENST00000362113 91 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 RNU6-1272P-201ENST00000362776 107 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 RNY4P28-201ENST00000365281 93 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 Y_RNA.341-201ENST00000365341 102 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 RNU6-301P-201ENST00000384277 107 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.26□□□□□ -1.89
DDX41Q9UJV9 MTCO1P44-201ENST00000441935 243 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 AC108938.1-201ENST00000451204 136 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 SNORD2.1-201ENST00000458762 69 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 AC010531.2-201ENST00000465012 153 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 RN7SL633P-201ENST00000488974 297 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 AC018868.1-201ENST00000491307 315 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 RNU6-826P-201ENST00000516827 104 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 AC079600.2-201ENST00000550076 130 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.26□□□□□ -1.89
DDX41Q9UJV9 MIR3162-201ENST00000581818 82 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 snoU18.1-201ENST00000629629 71 ntBASIC3.26□□□□□ -1.89
DDX41Q9UJV9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
DDX41Q9UJV9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
DDX41Q9UJV9 RNA5SP126-201ENST00000365092 109 ntBASIC3.25□□□□□ -1.89
DDX41Q9UJV9 Y_RNA.456-201ENST00000384232 111 ntBASIC3.25□□□□□ -1.89
DDX41Q9UJV9 BTF3P11-201ENST00000426582 477 ntBASIC3.25□□□□□ -1.89
DDX41Q9UJV9 AL121890.1-201ENST00000435457 205 ntBASIC3.25□□□□□ -1.89
DDX41Q9UJV9 AC245102.2-201ENST00000448956 180 ntBASIC3.25□□□□□ -1.89
DDX41Q9UJV9 PRELID3BP1-201ENST00000457142 540 ntBASIC3.25□□□□□ -1.89
DDX41Q9UJV9 SNORA81.3-201ENST00000517283 198 ntBASIC3.25□□□□□ -1.89
DDX41Q9UJV9 NDUFA5P6-201ENST00000542110 379 ntBASIC3.25□□□□□ -1.89
DDX41Q9UJV9 MIR4319-201ENST00000577285 85 ntBASIC3.25□□□□□ -1.89
DDX41Q9UJV9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms