Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC008133.2-201ENST00000624540 351 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 ZNF204P-201ENST00000416749 2397 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 Y_RNA.135-201ENST00000363439 95 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 SNORD116-1-201ENST00000384335 95 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 Y_RNA.530-201ENST00000384587 101 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 RNU6-417P-201ENST00000384712 107 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 MIR1253-201ENST00000408273 105 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 MIR1185-2-201ENST00000408687 86 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 RNU6-57P-201ENST00000411348 103 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 RNU6-1132P-201ENST00000459214 107 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 MTCO2P30-201ENST00000503662 364 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 RN7SKP49-201ENST00000516675 260 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 RNU1-142P-201ENST00000516682 145 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 RNU6-58P-201ENST00000517143 103 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 PIGPP4-201ENST00000584447 307 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 AL021879.1-201ENST00000611756 288 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 AL138726.1-201ENST00000614873 333 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 AC068137.4-201ENST00000638485 296 ntBASIC1.05□□□□□ -2.24
CTNNA3Q9UI47 SNORA33-201ENST00000363664 130 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 RNU6-596P-201ENST00000365395 98 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 RNU6-1031P-201ENST00000384773 107 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 MIR153-2-201ENST00000385225 87 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 RNA5SP323-201ENST00000391094 133 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 RNU2-16P-201ENST00000410712 136 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 RNU6-1068P-201ENST00000410958 103 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 RPL39P38-201ENST00000467018 153 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 Y_RNA.665-201ENST00000516177 98 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 SNORA70.22-201ENST00000517160 124 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 SUMO2P16-201ENST00000519475 264 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 MIR5696-201ENST00000578474 85 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 AC022432.1-201ENST00000595739 310 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 AL162424.1-201ENST00000602325 221 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 AC146944.4-201ENST00000602697 718 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 AL390123.1-201ENST00000603216 237 ntBASIC1.04□□□□□ -2.24
CTNNA3Q9UI47 Y_RNA.100-201ENST00000363141 102 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 RNU11-5P-201ENST00000391216 129 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 RNA5SP467-201ENST00000391274 118 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 RN7SKP200-201ENST00000410564 320 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 MTND1P11-201ENST00000456661 876 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 RNU7-187P-201ENST00000458985 68 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 RNU7-66P-201ENST00000459469 62 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 HMGN2P26-201ENST00000463169 339 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 AC083904.1-201ENST00000487828 231 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 TPRKBP2-201ENST00000565969 475 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 MTND1P15-201ENST00000579262 949 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 AC021506.2-201ENST00000612354 169 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 AC006001.4-201ENST00000622243 395 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 AC006435.5-201ENST00000624486 112 ntBASIC1.03□□□□□ -2.24
CTNNA3Q9UI47 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
CTNNA3Q9UI47 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 RNY3P3-201ENST00000363816 102 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 RNU6-17P-201ENST00000384245 107 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 RNU6-18P-201ENST00000384527 107 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 RNU6-95P-201ENST00000384697 107 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 MTND1P1-201ENST00000445453 368 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 AL442644.1-201ENST00000454390 3105 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 PCMTD1P1-201ENST00000455560 355 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 RNU7-94P-201ENST00000459576 63 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 RNU6-1281P-201ENST00000516223 105 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 RNU7-99P-201ENST00000516271 62 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 SCARNA16.2-201ENST00000516520 172 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 AC027288.2-201ENST00000553028 243 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 AC022217.4-201ENST00000604389 163 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 FAM71BP1-201ENST00000604431 523 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 U6.73-201ENST00000619194 103 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 AC022079.1-201ENST00000621546 602 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 MIR1321-201ENST00000637766 79 ntBASIC1.02□□□□□ -2.25
CTNNA3Q9UI47 RNU6-280P-201ENST00000364145 104 ntBASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 Y_RNA.256-201ENST00000364594 104 ntBASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 MIR193B-201ENST00000384907 83 ntBASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 RNU6-159P-201ENST00000391080 106 ntBASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 SNORA31.10-201ENST00000516482 106 ntBASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 RNU7-128P-201ENST00000517247 62 ntBASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 CBX3P8-201ENST00000532412 525 ntBASIC1.01□□□□□ -2.25
CTNNA3Q9UI47 AC010525.2-201ENST00000590920 195 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms