Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 SNORA4.4-201ENST00000515921 135 ntBASIC2.82□□□□□ -1.96
USP25Q9UHP3 MIR4643-201ENST00000577473 78 ntBASIC2.82□□□□□ -1.96
USP25Q9UHP3 AC008749.1-201ENST00000597650 306 ntBASIC2.82□□□□□ -1.96
USP25Q9UHP3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.82□□□□□ -1.96
USP25Q9UHP3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.82□□□□□ -1.96
USP25Q9UHP3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
USP25Q9UHP3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.82□□□□□ -1.96
USP25Q9UHP3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
USP25Q9UHP3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
USP25Q9UHP3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
USP25Q9UHP3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
USP25Q9UHP3 UBE2WP1-201ENST00000362030 340 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 Y_RNA.65-201ENST00000362846 100 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 Y_RNA.418-201ENST00000384029 102 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 MIR27B-201ENST00000385129 97 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 RN7SL429P-201ENST00000479090 223 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 RN7SL489P-201ENST00000486185 223 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 RN7SL327P-201ENST00000488659 223 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.81□□□□□ -1.96
USP25Q9UHP3 RNA5SP356-201ENST00000515972 94 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 RNA5SP82-201ENST00000516707 92 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 GTF3AP2-201ENST00000557014 266 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.81□□□□□ -1.96
USP25Q9UHP3 MIR3162-201ENST00000581818 82 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 SNORD11B-201ENST00000607707 90 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 RN7SL853P-201ENST00000617250 223 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 U4.3-201ENST00000621047 82 ntBASIC2.81□□□□□ -1.96
USP25Q9UHP3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
USP25Q9UHP3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
USP25Q9UHP3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
USP25Q9UHP3 SNORA25.1-201ENST00000362326 128 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 Y_RNA.117-201ENST00000363294 101 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 Y_RNA.200-201ENST00000364018 102 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 Y_RNA.275-201ENST00000364726 110 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 RNU6-301P-201ENST00000384277 107 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 MIR524-201ENST00000385242 87 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.8□□□□□ -1.96
USP25Q9UHP3 AC063976.3-201ENST00000426849 329 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 AC027124.2-201ENST00000428249 105 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 POLR2KP2-201ENST00000438155 177 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 AC004386.2-201ENST00000441858 148 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 HMGB3P3-201ENST00000510526 400 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 AP002001.1-203ENST00000534002 267 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 PRELID2P1-201ENST00000552837 301 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 AC026271.5-201ENST00000577873 130 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 AL109918.3-201ENST00000603072 338 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 SNORD14A-201ENST00000606526 91 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 MIR1248-201ENST00000629190 106 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 AC068205.3-201ENST00000636385 468 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 MIR3674-201ENST00000636576 68 ntBASIC2.8□□□□□ -1.96
USP25Q9UHP3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
USP25Q9UHP3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
USP25Q9UHP3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
USP25Q9UHP3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 RNU6-727P-201ENST00000363592 107 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 Y_RNA.274-201ENST00000364714 101 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 SNORA72.2-201ENST00000365028 127 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 RNU6-234P-201ENST00000365229 104 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 RNU4-70P-201ENST00000384579 139 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 RNU2-54P-201ENST00000410299 190 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 RNA5SP504-201ENST00000410676 117 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 RNU6-1199P-201ENST00000411249 104 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 MTCO1P5-201ENST00000433573 344 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.79□□□□□ -1.96
USP25Q9UHP3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.79□□□□□ -1.96
USP25Q9UHP3 MIR449C-201ENST00000516047 92 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 SNORA81.3-201ENST00000517283 198 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.79□□□□□ -1.96
USP25Q9UHP3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.79□□□□□ -1.96
USP25Q9UHP3 MIR4282-201ENST00000583613 67 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 AL162424.1-201ENST00000602325 221 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 AC006001.4-201ENST00000622243 395 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 AC091932.3-201ENST00000624223 323 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 AC008873.1-201ENST00000625051 138 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 AP006437.1-201ENST00000641440 3685 ntBASIC2.79□□□□□ -1.96
USP25Q9UHP3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.79□□□□□ -1.96
USP25Q9UHP3 AC005336.3-201ENST00000623833 2679 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 MIR21-201ENST00000362134 72 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 Y_RNA.29-201ENST00000362570 113 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 Y_RNA.76-201ENST00000362931 109 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 Y_RNA.82-201ENST00000363000 102 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 Y_RNA.92-201ENST00000363043 102 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 RNU6-743P-201ENST00000364151 106 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 Y_RNA.235-201ENST00000364412 102 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 RNU6-740P-201ENST00000364734 105 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 Y_RNA.306-201ENST00000365015 102 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 Y_RNA.312-201ENST00000365089 102 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 Y_RNA.322-201ENST00000365151 102 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 SNORA18.2-201ENST00000383865 132 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 RNU6-209P-201ENST00000384118 107 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 RNU6-514P-201ENST00000384208 107 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 SNORA67.2-201ENST00000384300 149 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 MIR1298-201ENST00000408783 112 ntBASIC2.78□□□□□ -1.96
USP25Q9UHP3 EDDM3CP-201ENST00000415977 425 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms