Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 U2.3-201ENST00000617785 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.19-201ENST00000618602 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 RNU2-1-201ENST00000618664 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.6-201ENST00000619225 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.5-201ENST00000619465 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 U2.10-201ENST00000620268 191 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 AC022513.1-201ENST00000624512 117 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 MIR3674-201ENST00000636576 68 ntBASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
HCN3Q9P1Z3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 RNU6-961P-201ENST00000363893 105 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 SNORA72.2-201ENST00000365028 127 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 SNORA64-201ENST00000384674 134 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 MIR17-201ENST00000385012 84 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 SNORA48.1-201ENST00000390879 135 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 RNU6-1153P-201ENST00000516760 105 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 IGKV3-31-201ENST00000523109 329 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 GNAI2P1-201ENST00000541815 315 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 AC015712.3-201ENST00000559380 164 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 AC005592.1-201ENST00000566527 1640 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 MIR338-201ENST00000636369 67 ntBASIC2.04□□□□□ -2.08
HCN3Q9P1Z3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 Y_RNA.28-201ENST00000362554 111 ntBASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 SNORD14.1-201ENST00000365609 90 ntBASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 SNORA67.3-201ENST00000384366 140 ntBASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 AC099677.2-201ENST00000436385 175 ntBASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 IPO7P1-201ENST00000442031 636 ntBASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 MIR3171-201ENST00000584270 74 ntBASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 AC240442.1-201ENST00000616055 283 ntBASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
HCN3Q9P1Z3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
HCN3Q9P1Z3 MTND4P1-201ENST00000457501 1466 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 Y_RNA.148-201ENST00000363557 117 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 Y_RNA.216-201ENST00000364205 93 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 Y_RNA.526-201ENST00000384572 110 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 RNU6-482P-201ENST00000391068 107 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AL023284.1-201ENST00000403956 276 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AL354751.2-201ENST00000415471 210 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AL158823.1-201ENST00000418441 478 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 SDAD1P3-201ENST00000427380 333 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 RPL23AP6-201ENST00000446637 472 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 RPL23AP3-201ENST00000453844 468 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AC104435.1-201ENST00000483483 166 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AL163540.1-201ENST00000485382 386 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AC108210.2-201ENST00000503681 201 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AC040926.1-201ENST00000530195 238 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AP002001.1-203ENST00000534002 267 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 MIR4648-201ENST00000580107 72 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AC004467.1-201ENST00000615678 330 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AP000553.5-201ENST00000641933 54 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 AC008555.8-201ENST00000623602 2168 ntBASIC2.02□□□□□ -2.09
HCN3Q9P1Z3 RNU6-626P-201ENST00000363354 107 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 SNORA22B-201ENST00000383876 138 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 SNORA48.3-201ENST00000391081 134 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 RNA5SP323-201ENST00000391094 133 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 AL117342.1-201ENST00000404861 406 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 MIR1302-11-201ENST00000408051 138 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 MIR1302-9-201ENST00000408365 138 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 MIR1302-10-201ENST00000408734 138 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 AL356055.1-201ENST00000602528 446 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 AL390123.1-201ENST00000603216 237 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 AC069114.2-201ENST00000604699 304 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 MIR1302-2-201ENST00000607096 138 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 AL353149.1-201ENST00000610667 244 ntBASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HCN3Q9P1Z3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2□□□□□ -2.09
HCN3Q9P1Z3 RNU6-20P-201ENST00000384106 107 ntBASIC2□□□□□ -2.09
HCN3Q9P1Z3 RNA5SP467-201ENST00000391274 118 ntBASIC2□□□□□ -2.09
HCN3Q9P1Z3 MRPL35P1-201ENST00000404272 572 ntBASIC2□□□□□ -2.09
HCN3Q9P1Z3 CST2P1-201ENST00000425770 87 ntBASIC2□□□□□ -2.09
HCN3Q9P1Z3 AL591806.2-201ENST00000433122 173 ntBASIC2□□□□□ -2.09
HCN3Q9P1Z3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2□□□□□ -2.09
HCN3Q9P1Z3 AL603825.1-201ENST00000438481 80 ntBASIC2□□□□□ -2.09
HCN3Q9P1Z3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms