Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 U6.108-201ENST00000637764 58 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 RNU6-1215P-201ENST00000384441 102 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 MIR32-201ENST00000384965 70 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 AC092989.1-201ENST00000481235 277 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 RPL30P10-201ENST00000488148 337 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 RNA5SP54-201ENST00000516951 92 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 SUMO2P16-201ENST00000519475 264 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 AC136443.5-201ENST00000603741 370 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 AC019193.3-201ENST00000609144 554 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 AL359075.3-201ENST00000613288 217 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 AC090517.2-201ENST00000614966 680 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 AC006504.8-201ENST00000621046 635 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 MIR3662-201ENST00000637030 95 ntBASIC1.04□□□□□ -2.24
KLHL28Q9NXS3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 RNU6-1059P-201ENST00000363752 98 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 RNU6-373P-201ENST00000411247 98 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 AC010154.1-201ENST00000425857 269 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 RPL39P38-201ENST00000467018 153 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 RPS23P4-201ENST00000487908 423 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 RNU6-718P-201ENST00000516166 105 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 RNU6-864P-201ENST00000516256 108 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 SNORA31.10-201ENST00000516482 106 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 RNU1-117P-201ENST00000517041 158 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 MTND1P5-201ENST00000517906 940 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 AL078603.1-201ENST00000603824 313 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 AC022217.4-201ENST00000604389 163 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 AC124303.1-201ENST00000605703 360 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 MIR3688-2-201ENST00000636963 87 ntBASIC1.03□□□□□ -2.24
KLHL28Q9NXS3 SNORD115-8-201ENST00000363856 82 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 RNU4-9P-201ENST00000364951 139 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 SNORD115-38-201ENST00000365037 82 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 RNU6-245P-201ENST00000384020 107 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.453-201ENST00000384223 109 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 MTATP6P13-201ENST00000438531 667 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 DAP3P1-201ENST00000441522 278 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 SNORD116-28-201ENST00000516123 91 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 RNU6-58P-201ENST00000517143 103 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 AK6P2-201ENST00000549020 471 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 AC027288.2-201ENST00000553028 243 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 UBL5P4-201ENST00000562584 236 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 AL390123.1-201ENST00000603216 237 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 BX284668.6-201ENST00000606899 438 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 SNORD11B-201ENST00000607707 90 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
KLHL28Q9NXS3 RNU1-124P-201ENST00000363861 145 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 SNORD87-201ENST00000364849 89 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.533-201ENST00000384596 114 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 RN7SKP200-201ENST00000410564 320 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 RPL30P16-201ENST00000419341 429 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.655-201ENST00000515919 96 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 ACA59.1-201ENST00000515966 143 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 RNU6-165P-201ENST00000517170 99 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 RNA5SP454-201ENST00000517231 127 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 MIR5696-201ENST00000578474 85 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 SNORA4-201ENST00000584302 138 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 U4.5-201ENST00000617137 123 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 AC068647.2-201ENST00000637380 353 ntBASIC1.01□□□□□ -2.25
KLHL28Q9NXS3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
KLHL28Q9NXS3 MTND4P12-201ENST00000498999 1377 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.48-201ENST00000362710 103 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 RNU6-727P-201ENST00000363592 107 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 RNU6-873P-201ENST00000363833 107 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 SNORD115-32-201ENST00000364079 82 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.301-201ENST00000364990 103 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.319-201ENST00000365138 92 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 Y_RNA.473-201ENST00000384333 102 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
KLHL28Q9NXS3 SNORA12.1-201ENST00000390873 148 ntBASIC1□□□□□ -2.25
KLHL28Q9NXS3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms