Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC011753.1-201ENST00000451001 220 ntBASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 AC005042.3-201ENST00000453230 174 ntBASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 HMGB3P17-201ENST00000504195 649 ntBASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 AL117187.1-201ENST00000555482 181 ntBASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 AC007229.1-201ENST00000590455 412 ntBASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 SDR42E1P4-201ENST00000620894 481 ntBASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 FO624990.1-201ENST00000636373 85 ntBASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
LIN7CQ9NUP9 SNORA25.6-201ENST00000364121 118 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 RNU1-96P-201ENST00000364163 162 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.222-201ENST00000364264 102 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.286-201ENST00000364813 102 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 U3.40-201ENST00000408706 208 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 RNA5SP501-201ENST00000410990 112 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 SEPT14P8-201ENST00000508026 178 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 RNU6-1143P-201ENST00000516125 104 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 RNVU1-2-201ENST00000516326 135 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 AC023157.2-201ENST00000540596 141 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 AC079600.2-201ENST00000550076 130 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 AL049779.4-201ENST00000604500 156 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 AC005828.6-201ENST00000606610 232 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 SNORD113-5-201ENST00000607261 78 ntBASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
LIN7CQ9NUP9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNU6-1309P-201ENST00000363305 108 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 SNORA33-201ENST00000363664 130 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 SNORA5B-201ENST00000363786 132 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNU1-112P-201ENST00000364401 164 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNU6-407P-201ENST00000365280 104 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNU1-138P-201ENST00000384093 164 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNU6-102P-201ENST00000384485 104 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNU6-1105P-201ENST00000384774 107 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 MIR215-201ENST00000384858 110 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNA5SP467-201ENST00000391274 118 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AL031003.1-201ENST00000404229 172 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNA5SP184-201ENST00000411071 108 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AC096920.1-201ENST00000423991 241 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AL358176.2-201ENST00000425769 204 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RPS27P22-201ENST00000478056 241 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AC025465.3-201ENST00000510570 311 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AC096725.1-201ENST00000514266 313 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNA5SP356-201ENST00000515972 94 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 RNU6-436P-201ENST00000516171 114 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AP003733.2-201ENST00000529409 171 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 MIR5094-201ENST00000578766 85 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 PRR13P7-201ENST00000605538 430 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 AC007336.1-201ENST00000576365 3828 ntBASIC2.13□□□□□ -2.07
LIN7CQ9NUP9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 RNA5SP276-201ENST00000362580 94 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 SNORA27.1-201ENST00000362604 124 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 SNORD81.1-201ENST00000363064 77 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.124-201ENST00000363339 93 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 MIR634-201ENST00000385208 97 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 CST2P1-201ENST00000425770 87 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 SNORD109B-201ENST00000458961 67 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 SNORD109A-201ENST00000459128 67 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 RN7SKP132-201ENST00000516001 208 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 RNU6-496P-201ENST00000516145 99 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 AL137100.2-201ENST00000555786 315 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 AL033523.1-201ENST00000605153 153 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 AC006435.5-201ENST00000624486 112 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 MTND5P6-201ENST00000422338 1798 ntBASIC2.12□□□□□ -2.07
LIN7CQ9NUP9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.329-201ENST00000365209 107 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 Y_RNA.574-201ENST00000384766 95 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 SNORA48.1-201ENST00000390879 135 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 MIR873-201ENST00000401120 77 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 SNORA11.4-201ENST00000408823 129 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 CR769767.1-201ENST00000436337 346 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 MTND2P29-201ENST00000438595 412 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 MRPS10P1-201ENST00000448483 130 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 SUMO1P2-201ENST00000452524 304 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 HSPE1P25-201ENST00000455484 251 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 RNA5SP20-201ENST00000515976 84 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 RNA5SP282-201ENST00000516355 108 ntBASIC2.11□□□□□ -2.07
LIN7CQ9NUP9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms