Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MIR153-2-201ENST00000385225 87 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 MIR660-201ENST00000385235 97 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 AL355796.1-201ENST00000406706 323 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 RPL30P16-201ENST00000419341 429 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.75□□□□□ -2.29
TREX1Q9NSU2 RNU7-94P-201ENST00000459576 63 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 RNU6-835P-201ENST00000516974 104 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 RNU7-128P-201ENST00000517247 62 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.75□□□□□ -2.29
TREX1Q9NSU2 AL162424.1-201ENST00000602325 221 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 AC108706.1-201ENST00000611053 297 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.75□□□□□ -2.29
TREX1Q9NSU2 AC099654.12-201ENST00000639868 649 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 MTND4P12-201ENST00000498999 1377 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
TREX1Q9NSU2 RNU4-79P-201ENST00000362764 141 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 RNU6-254P-201ENST00000363377 107 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 SNORD115-8-201ENST00000363856 82 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 SNORD115-38-201ENST00000365037 82 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.354-201ENST00000365448 111 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 RNU6-128P-201ENST00000383976 107 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 RNU6-1042P-201ENST00000384204 107 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 MIR19B1-201ENST00000384829 87 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 MIR520E-201ENST00000384867 87 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 MIR514A2-201ENST00000385131 88 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 MIR514A3-201ENST00000385132 88 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 DEFB108C-201ENST00000400154 252 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 RNU6-648P-201ENST00000410190 107 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 RNU6-1068P-201ENST00000410958 103 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.74□□□□□ -2.29
TREX1Q9NSU2 AC063976.4-201ENST00000421971 163 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.74□□□□□ -2.29
TREX1Q9NSU2 AC079354.2-201ENST00000453523 154 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 RPS27P22-201ENST00000478056 241 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 MTCO2P30-201ENST00000503662 364 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 APOOP3-201ENST00000536787 586 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 AC023157.2-201ENST00000540596 141 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 MIR4438-201ENST00000585271 93 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 RNU6-89P-201ENST00000606519 100 ntBASIC0.74□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.372-201ENST00000365599 102 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 SNORA12.1-201ENST00000390873 148 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 ERLEC1P1-201ENST00000433806 578 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 AC002429.1-201ENST00000437672 148 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 TPT1P7-201ENST00000458300 517 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 TRBVA-201ENST00000498804 316 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 RNU6-107P-201ENST00000516643 102 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.73□□□□□ -2.29
TREX1Q9NSU2 AK6P2-201ENST00000549020 471 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 ZNF519P2-201ENST00000557032 169 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 UBL5P4-201ENST00000562584 236 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 AL158211.1-201ENST00000566763 763 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 MTND1P15-201ENST00000579262 949 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 AC068790.6-201ENST00000602558 258 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 RN7SKP299-201ENST00000606679 301 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 SNORA28-201ENST00000606769 126 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 MIR3974-201ENST00000637126 96 ntBASIC0.73□□□□□ -2.29
TREX1Q9NSU2 RNU6-199P-201ENST00000362954 107 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.77-201ENST00000362962 107 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.124-201ENST00000363339 93 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 SNORD115-32-201ENST00000364079 82 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 RNU6-522P-201ENST00000364497 107 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.265-201ENST00000364677 108 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 SNORD114-24-201ENST00000365029 72 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 RNU6-793P-201ENST00000384233 104 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 AL451046.2-201ENST00000403074 277 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 RNU6-1054P-201ENST00000411293 104 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.72□□□□□ -2.29
TREX1Q9NSU2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.72□□□□□ -2.29
TREX1Q9NSU2 AC245047.7-201ENST00000440265 293 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 NDUFB4P10-201ENST00000452541 359 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 AC091179.3-201ENST00000474761 144 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.72□□□□□ -2.29
TREX1Q9NSU2 ACA59.1-201ENST00000515966 143 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 RNU6-322P-201ENST00000516010 103 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 RNA5SP168-201ENST00000516642 112 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 RN7SKP49-201ENST00000516675 260 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 AC136628.3-201ENST00000521868 290 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 7SK.7-201ENST00000603504 247 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 AC080078.2-201ENST00000603766 501 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 MIR6515-201ENST00000619843 57 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.72□□□□□ -2.29
TREX1Q9NSU2 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 AC068700.1-201ENST00000565862 3754 ntBASIC0.72□□□□□ -2.29
TREX1Q9NSU2 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 Y_RNA.100-201ENST00000363141 102 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 Y_RNA.179-201ENST00000363844 90 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 RNU6-280P-201ENST00000364145 104 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 CALM2P3-201ENST00000400429 449 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 MIR548J-201ENST00000408833 112 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 AL590632.1-201ENST00000424289 371 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 MTCO1P20-201ENST00000425366 358 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.71□□□□□ -2.3
TREX1Q9NSU2 SNORD65B-201ENST00000459126 73 ntBASIC0.71□□□□□ -2.3
TREX1Q9NSU2 RPS29P1-201ENST00000465274 159 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms