Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RNU6-297P-201ENST00000384636 107 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 RNA5SP482-201ENST00000391269 118 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.15□□□□□ -2.39
CISHQ9NSE2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.15□□□□□ -2.39
CISHQ9NSE2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
CISHQ9NSE2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.15□□□□□ -2.39
CISHQ9NSE2 RNU7-180P-201ENST00000459240 63 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 HMGN2P26-201ENST00000463169 339 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.15□□□□□ -2.39
CISHQ9NSE2 AC092436.3-201ENST00000511788 257 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 AP002963.1-201ENST00000530590 184 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 SCOCP1-201ENST00000554676 349 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.15□□□□□ -2.39
CISHQ9NSE2 AC010620.1-201ENST00000601088 1102 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 OR5AK4P-201ENST00000635912 903 ntBASIC0.15□□□□□ -2.39
CISHQ9NSE2 RNU6-1214P-201ENST00000363650 109 ntBASIC0.14□□□□□ -2.39
CISHQ9NSE2 MIR140-201ENST00000385282 100 ntBASIC0.14□□□□□ -2.39
CISHQ9NSE2 AL049545.1-201ENST00000401856 572 ntBASIC0.14□□□□□ -2.39
CISHQ9NSE2 RNU6-177P-201ENST00000411257 104 ntBASIC0.14□□□□□ -2.39
CISHQ9NSE2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.14□□□□□ -2.39
CISHQ9NSE2 AL356010.1-201ENST00000456364 102 ntBASIC0.14□□□□□ -2.39
CISHQ9NSE2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.14□□□□□ -2.39
CISHQ9NSE2 AC091133.4-201ENST00000511142 308 ntBASIC0.14□□□□□ -2.39
CISHQ9NSE2 RNU6-58P-201ENST00000517143 103 ntBASIC0.14□□□□□ -2.39
CISHQ9NSE2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.14□□□□□ -2.39
CISHQ9NSE2 AC009161.2-201ENST00000624626 138 ntBASIC0.14□□□□□ -2.39
CISHQ9NSE2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.13□□□□□ -2.39
CISHQ9NSE2 Y_RNA.336-201ENST00000365307 109 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 RNU6-784P-201ENST00000384330 106 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 RNU6-456P-201ENST00000384493 107 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 RNY1P4-201ENST00000384595 115 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 MTCO3P19-201ENST00000415864 321 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.13□□□□□ -2.39
CISHQ9NSE2 MTCO2P18-201ENST00000457151 658 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 SNORD65B-201ENST00000459126 73 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 RPL23AP75-201ENST00000491601 451 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.13□□□□□ -2.39
CISHQ9NSE2 SNORA14.1-201ENST00000516113 141 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 RNU6-341P-201ENST00000516973 96 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 AP001372.4-201ENST00000524889 472 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 AC036111.3-201ENST00000526389 112 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 MTND1P35-201ENST00000526739 508 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 AP002004.2-201ENST00000531656 154 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.13□□□□□ -2.39
CISHQ9NSE2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.13□□□□□ -2.39
CISHQ9NSE2 AC091178.2-201ENST00000584401 117 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 RNU6-94P-201ENST00000607728 107 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 AL138726.1-201ENST00000614873 333 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 AL008636.1-201ENST00000625038 1018 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 FER-210ENST00000628534 558 ntTSL 5 BASIC0.13□□□□□ -2.39
CISHQ9NSE2 AC068137.4-201ENST00000638485 296 ntBASIC0.13□□□□□ -2.39
CISHQ9NSE2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CISHQ9NSE2 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 SNORA1B-201ENST00000362535 133 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 RNU6-181P-201ENST00000363225 107 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 RNU6-833P-201ENST00000363486 107 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 RNU6-517P-201ENST00000384362 110 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 SNORD105-201ENST00000386910 85 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 SNORD111-201ENST00000408139 94 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 RNU6-248P-201ENST00000410720 107 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.12□□□□□ -2.39
CISHQ9NSE2 AC133104.1-201ENST00000429100 218 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 AL033528.1-201ENST00000453780 140 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.12□□□□□ -2.39
CISHQ9NSE2 RN7SKP164-201ENST00000516138 266 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 RNU6-1198P-201ENST00000516904 67 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 RNU6-445P-201ENST00000516949 107 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 RNU6-1116P-201ENST00000517269 99 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
CISHQ9NSE2 AC023157.2-201ENST00000540596 141 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.12□□□□□ -2.39
CISHQ9NSE2 CPDP1-201ENST00000579660 283 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 MIR4514-201ENST00000581410 57 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 MIR4424-201ENST00000585257 86 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 AC011458.1-201ENST00000604034 617 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 HULC.1-201ENST00000612720 240 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 AP000720.1-201ENST00000625091 483 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.12□□□□□ -2.39
CISHQ9NSE2 AC106754.1-201ENST00000562632 1513 ntBASIC0.12□□□□□ -2.39
CISHQ9NSE2 Y_RNA.112-201ENST00000363250 102 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 RNU4-28P-201ENST00000364739 141 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 RNU6-1329P-201ENST00000365664 107 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 Y_RNA.415-201ENST00000384012 112 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 SNORA40.3-201ENST00000390964 122 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 MIR1827-201ENST00000408549 66 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 RNU2-9P-201ENST00000410194 145 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.11□□□□□ -2.39
CISHQ9NSE2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.11□□□□□ -2.39
CISHQ9NSE2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.11□□□□□ -2.39
CISHQ9NSE2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.11□□□□□ -2.39
CISHQ9NSE2 AC091021.1-201ENST00000468051 388 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 AC097462.1-201ENST00000514125 324 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 AC087854.1-201ENST00000519706 414 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 AC104576.1-201ENST00000524225 88 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.11□□□□□ -2.39
CISHQ9NSE2 RPL21P9-201ENST00000556149 474 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 AC011712.1-201ENST00000588959 234 ntBASIC0.11□□□□□ -2.39
CISHQ9NSE2 MIR8076-201ENST00000611401 83 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms