Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 AC025465.3-201ENST00000510570 311 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 AC008834.1-201ENST00000511612 175 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-559P-201ENST00000516151 98 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-307P-201ENST00000516743 106 ntBASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.303-201ENST00000364998 94 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-890P-201ENST00000384121 107 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 RNA5SP109-201ENST00000391010 116 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 MIR1323-201ENST00000408090 73 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.595-201ENST00000410403 105 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-1186P-201ENST00000410429 97 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 RPL30P15-201ENST00000457129 321 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 AL163195.1-201ENST00000496941 348 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 AC022493.2-201ENST00000506122 481 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 SNORA44.1-201ENST00000517031 108 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 AC113139.1-201ENST00000605049 239 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 AC095038.3-201ENST00000634439 195 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 MTND4LP32-201ENST00000636111 270 ntBASIC1.35□□□□□ -2.19
EXOSC3Q9NQT5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 RNU6-1266P-201ENST00000362794 105 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 SNORA72.1-201ENST00000363485 129 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 Y_RNA.142-201ENST00000363491 102 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 SNORA72.2-201ENST00000365028 127 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 MIR1267-201ENST00000408723 78 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 AL606517.2-201ENST00000442855 241 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 MTCO3P10-201ENST00000455912 772 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 MIR2053-201ENST00000459295 91 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 RPL26P26-201ENST00000480251 434 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 MIR5690-201ENST00000583739 73 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 U6.108-201ENST00000637764 58 ntBASIC1.34□□□□□ -2.19
EXOSC3Q9NQT5 AC100821.1-201ENST00000523153 2479 ntBASIC1.34□□□□□ -2.2
EXOSC3Q9NQT5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 MIR126-201ENST00000362291 85 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-1145P-201ENST00000384246 107 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-318P-201ENST00000384283 103 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-360P-201ENST00000390944 104 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 SNORA75.6-201ENST00000391318 127 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 ELOCP21-201ENST00000412558 336 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 AC069257.2-201ENST00000441819 155 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 AC105758.1-201ENST00000506038 399 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 RNA5SP481-201ENST00000516814 122 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-264P-201ENST00000517134 104 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 MIR3198-2-201ENST00000577868 80 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 SNORA77B-201ENST00000578179 125 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 UBE2V2P2-201ENST00000587677 504 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 AC104260.1-201ENST00000616660 539 ntBASIC1.33□□□□□ -2.2
EXOSC3Q9NQT5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 RNY3P11-201ENST00000364153 102 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-338P-201ENST00000383888 105 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-203P-201ENST00000384038 104 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 MIR515-2-201ENST00000384883 83 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 MIR515-1-201ENST00000384884 83 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-1156P-201ENST00000410365 100 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 AC114482.1-201ENST00000418010 247 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 TOMM22P2-201ENST00000430735 237 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 JTBP1-201ENST00000441314 247 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 UBE2V1P7-201ENST00000446395 340 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 snoU13.9-201ENST00000458927 103 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 Y_RNA.653-201ENST00000459091 95 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 SNORD65B-201ENST00000459126 73 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 snoU13.27-201ENST00000459278 104 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-277P-201ENST00000516272 106 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 RNU1-142P-201ENST00000516682 145 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 AC023157.2-201ENST00000540596 141 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 AL137100.2-201ENST00000555786 315 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 AL359075.3-201ENST00000613288 217 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 AC087588.2-201ENST00000617667 426 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 MIR8063-201ENST00000621930 81 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 MIR1302-1-201ENST00000637932 143 ntBASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
EXOSC3Q9NQT5 RNU4-13P-201ENST00000364019 141 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 RNU6-1297P-201ENST00000384415 104 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 RPL21P1-201ENST00000399532 476 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 COX6CP10-201ENST00000416832 224 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 MRPS18CP6-201ENST00000423587 223 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AC010154.1-201ENST00000425857 269 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AL591806.2-201ENST00000433122 173 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 PCNPP5-201ENST00000452246 481 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 RNU7-34P-201ENST00000459394 64 ntBASIC1.31□□□□□ -2.2
EXOSC3Q9NQT5 RNU7-169P-201ENST00000459456 61 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms