Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.98□□□□□ -2.09
HINT3Q9NQE9 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 AL355297.3-201ENST00000604082 446 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.15-201ENST00000611544 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.16-201ENST00000613119 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.12-201ENST00000613778 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.20-201ENST00000613956 192 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.9-201ENST00000615427 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.11-201ENST00000616345 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.2-201ENST00000616535 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.3-201ENST00000617785 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.19-201ENST00000618602 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 RNU2-1-201ENST00000618664 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.6-201ENST00000619225 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.5-201ENST00000619465 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 U2.10-201ENST00000620268 191 ntBASIC1.98□□□□□ -2.09
HINT3Q9NQE9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HINT3Q9NQE9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HINT3Q9NQE9 Y_RNA.143-201ENST00000363520 106 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 Y_RNA.153-201ENST00000363615 91 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 Y_RNA.230-201ENST00000364348 109 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 SNORA63C-201ENST00000364578 129 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 SNORA72.2-201ENST00000365028 127 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 SNORA6-201ENST00000384033 151 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 RNA5SP450-201ENST00000411206 102 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HINT3Q9NQE9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.97□□□□□ -2.09
HINT3Q9NQE9 ATP5J2P3-201ENST00000451550 258 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.97□□□□□ -2.09
HINT3Q9NQE9 AC055731.1-201ENST00000474387 401 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 TRBV12-1-201ENST00000479785 344 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 RNU6-897P-201ENST00000517135 105 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 MIR4423-201ENST00000580922 80 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 AC245060.5-201ENST00000610778 3293 ntBASIC1.97□□□□□ -2.09
HINT3Q9NQE9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HINT3Q9NQE9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HINT3Q9NQE9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HINT3Q9NQE9 ZNF658B-202ENST00000615961 3375 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.101-201ENST00000363154 102 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.462-201ENST00000384268 102 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.96□□□□□ -2.1
HINT3Q9NQE9 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 SNORD65B-201ENST00000459126 73 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 SUMO2P18-201ENST00000518873 252 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 AC131281.1-201ENST00000522984 164 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.96□□□□□ -2.1
HINT3Q9NQE9 AC005786.1-201ENST00000588553 154 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 AC022513.1-201ENST00000624512 117 ntBASIC1.96□□□□□ -2.1
HINT3Q9NQE9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HINT3Q9NQE9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HINT3Q9NQE9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HINT3Q9NQE9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.183-201ENST00000363882 113 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RNU6-937P-201ENST00000384325 106 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RNU6-738P-201ENST00000384531 106 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.570-201ENST00000384750 101 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RNA5SP425-201ENST00000410336 112 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RNU2-20P-201ENST00000410425 191 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RNU5A-5P-201ENST00000411054 116 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 AL356320.1-201ENST00000429616 163 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 AC073910.1-201ENST00000445047 438 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RPL23AP7-203ENST00000449021 469 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 AC010655.3-201ENST00000478818 450 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RNU6-1146P-201ENST00000516282 102 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RNU6-1046P-201ENST00000516538 107 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.720-201ENST00000517166 92 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 RNU2-12P-201ENST00000517216 168 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 AC136932.1-201ENST00000574771 208 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 MIR3684-201ENST00000579779 74 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 AL353149.1-201ENST00000610667 244 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 MIR6840-201ENST00000611937 71 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 MIR6873-201ENST00000622788 63 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 U6.115-201ENST00000636045 103 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 MIR338-201ENST00000636369 67 ntBASIC1.95□□□□□ -2.1
HINT3Q9NQE9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HINT3Q9NQE9 snoU2-30.2-201ENST00000362805 70 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.152-201ENST00000363578 100 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.210-201ENST00000364161 110 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 RNU6-1175P-201ENST00000365200 107 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 SNORD63-201ENST00000384262 68 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HINT3Q9NQE9 AL117342.1-201ENST00000404861 406 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 SNORA3.2-201ENST00000408221 125 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 MIR1253-201ENST00000408273 105 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 RNU2-54P-201ENST00000410299 190 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 RNA5SP338-201ENST00000410495 85 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 Z98742.3-201ENST00000418637 326 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 DPH3P2-201ENST00000422618 250 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 HMGN2P34-201ENST00000437647 269 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
HINT3Q9NQE9 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 YWHAEP4-201ENST00000505390 198 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.94□□□□□ -2.1
HINT3Q9NQE9 AC007229.1-201ENST00000590455 412 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms