Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.01□□□□□ -2.25
HMG20AQ9NP66 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.01□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.594-201ENST00000410373 140 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AC004965.1-201ENST00000413033 213 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AL353997.1-201ENST00000432936 108 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AC027119.1-201ENST00000440877 241 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AC069257.2-201ENST00000441819 155 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.01□□□□□ -2.25
HMG20AQ9NP66 U8.22-201ENST00000459141 133 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.01□□□□□ -2.25
HMG20AQ9NP66 RNU6-107P-201ENST00000516643 102 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 RNU6-902P-201ENST00000517212 91 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AC019288.1-201ENST00000557918 224 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AC068790.6-201ENST00000602558 258 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AC018462.2-201ENST00000605375 395 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AL365434.2-201ENST00000607979 234 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 AL357075.2-201ENST00000614906 189 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.01□□□□□ -2.25
HMG20AQ9NP66 MTND5P16-201ENST00000460269 1703 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 MTND5P35-201ENST00000557537 1720 ntBASIC1.01□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.2-201ENST00000362330 96 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 RNU6-137P-201ENST00000363680 108 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 RNU6-280P-201ENST00000364145 104 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 SNORA72.2-201ENST00000365028 127 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 MIR548K-201ENST00000408406 116 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 RNU6-1001P-201ENST00000411265 100 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AC008134.1-201ENST00000420943 193 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AC108667.1-201ENST00000428618 249 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 RPS3AP52-201ENST00000435639 297 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 MTND4P18-201ENST00000447010 465 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 RPL7P42-201ENST00000481005 679 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1□□□□□ -2.25
HMG20AQ9NP66 AC079140.2-201ENST00000506193 142 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AC093303.1-201ENST00000514549 295 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 RNU1-142P-201ENST00000516682 145 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AF235103.2-201ENST00000525753 346 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AC023157.2-201ENST00000540596 141 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AC093023.1-201ENST00000547375 507 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 MIR5701-3-201ENST00000578890 82 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 MIR5701-1-201ENST00000585138 82 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AC125232.2-201ENST00000592457 143 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 BNIP3P10-201ENST00000605360 577 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AC010999.1-201ENST00000611856 324 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 AC021506.2-201ENST00000612354 169 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 MIR5701-2-201ENST00000615634 82 ntBASIC1□□□□□ -2.25
HMG20AQ9NP66 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 RNA5SP361-201ENST00000362686 118 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.339-201ENST00000365325 102 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.404-201ENST00000383978 102 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 MIR618-201ENST00000385287 98 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 RNU6-1050P-201ENST00000410388 107 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 RPL23AP36-201ENST00000413895 458 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AL139396.1-201ENST00000421137 167 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 USP9YP16-201ENST00000430287 407 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 FTH1P12-201ENST00000432137 551 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 USP9YP23-201ENST00000455085 407 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 SNORD65B-201ENST00000459126 73 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 RPS26P45-201ENST00000471748 340 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AC018710.1-201ENST00000506509 158 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 RNU6-1114P-201ENST00000516022 107 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.706-201ENST00000516933 99 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 SUMO2P16-201ENST00000519475 264 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AC024995.1-201ENST00000523014 93 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 MIR3937-201ENST00000580135 106 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 7SK.7-201ENST00000603504 247 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AC009229.3-201ENST00000608056 282 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AL359075.3-201ENST00000613288 217 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AL078604.3-201ENST00000615580 211 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 U6.73-201ENST00000619194 103 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AL353770.2-201ENST00000620024 78 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 MIR8054-201ENST00000620877 86 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 AC139792.2-201ENST00000624218 587 ntBASIC0.99□□□□□ -2.25
HMG20AQ9NP66 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HMG20AQ9NP66 Y_RNA.184-201ENST00000363884 108 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 MIR515-2-201ENST00000384883 83 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 MIR515-1-201ENST00000384884 83 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 MTND3P8-201ENST00000412909 339 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.98□□□□□ -2.25
HMG20AQ9NP66 AC245517.4-201ENST00000448601 281 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.98□□□□□ -2.25
HMG20AQ9NP66 MTND3P10-201ENST00000450967 341 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 NDUFB4P10-201ENST00000452541 359 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 RNU7-87P-201ENST00000459343 62 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.98□□□□□ -2.25
HMG20AQ9NP66 RNU6-120P-201ENST00000516077 103 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 RNU6-1016P-201ENST00000516689 94 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 RNU6-1213P-201ENST00000517075 94 ntBASIC0.98□□□□□ -2.25
HMG20AQ9NP66 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.98□□□□□ -2.25
HMG20AQ9NP66 CYP3A52P-201ENST00000563326 91 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms