Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC009248.2-201ENST00000619826 254 ntBASIC1.19□□□□□ -2.22
TM9SF3Q9HD45 MIR6734-201ENST00000621166 68 ntBASIC1.19□□□□□ -2.22
TM9SF3Q9HD45 AL078596.1-201ENST00000624856 447 ntBASIC1.19□□□□□ -2.22
TM9SF3Q9HD45 RNU6-222P-201ENST00000362438 107 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 snoU2-30.2-201ENST00000362805 70 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 RNU4-9P-201ENST00000364951 139 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 Y_RNA.319-201ENST00000365138 92 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 RNU6-1235P-201ENST00000384559 107 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 MIR586-201ENST00000385035 97 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 MIR513A1-201ENST00000385138 129 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 AL606517.2-201ENST00000442855 241 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 RNU6-498P-201ENST00000459468 107 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 AC011352.1-201ENST00000512300 793 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 Y_RNA.682-201ENST00000516457 100 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 RNU6-566P-201ENST00000516790 107 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 RN7SKP88-201ENST00000516847 250 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 7SK.8-201ENST00000612110 250 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 7SK.11-201ENST00000615477 250 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 7SK.13-201ENST00000622040 250 ntBASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TM9SF3Q9HD45 Y_RNA.86-201ENST00000363020 111 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 Y_RNA.301-201ENST00000364990 103 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 RNU6-541P-201ENST00000384709 110 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 MIR515-2-201ENST00000384883 83 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 MIR515-1-201ENST00000384884 83 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 MIR194-1-201ENST00000384892 85 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 RNA5SP109-201ENST00000391010 116 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 AC243428.1-201ENST00000421099 264 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 AC005002.2-201ENST00000438228 269 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 AP000870.1-201ENST00000472927 406 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 AC091179.3-201ENST00000474761 144 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 AC103851.1-201ENST00000506833 274 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 MIR4790-201ENST00000577799 79 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 MZT1P2-201ENST00000604387 248 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 AC007014.2-201ENST00000615581 479 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 AC073869.6-201ENST00000640656 341 ntBASIC1.17□□□□□ -2.22
TM9SF3Q9HD45 Y_RNA.405-201ENST00000383979 100 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 RNU6-1080P-201ENST00000383982 107 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 Y_RNA.451-201ENST00000384200 100 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 Y_RNA.524-201ENST00000384564 100 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 Y_RNA.561-201ENST00000384694 100 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 MTND1P17-201ENST00000448961 204 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 AC114982.1-201ENST00000469402 321 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 AL133373.1-201ENST00000497098 94 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 RNU6-1146P-201ENST00000516282 102 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 CBX3P8-201ENST00000532412 525 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 MIR5696-201ENST00000578474 85 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 AL050343.2-201ENST00000607338 280 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 SNORD11B-201ENST00000607707 90 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 AL365434.2-201ENST00000607979 234 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 AC093913.1-201ENST00000614178 329 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 U4.5-201ENST00000617137 123 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 AC008873.1-201ENST00000625051 138 ntBASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
TM9SF3Q9HD45 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 Y_RNA.157-201ENST00000363638 102 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 RNU6-17P-201ENST00000384245 107 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 RNU6-18P-201ENST00000384527 107 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 MIR1253-201ENST00000408273 105 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 AC009161.1-201ENST00000417306 376 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 AC010154.1-201ENST00000425857 269 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 MTND4LP16-201ENST00000440828 295 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 RNU7-34P-201ENST00000459394 64 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 RNU6-344P-201ENST00000516635 111 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 AC025647.1-201ENST00000517879 253 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 FRG2DP-202ENST00000566967 323 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 MIR5695-201ENST00000579717 85 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 MIR4273-201ENST00000582824 84 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 FAM106DP-201ENST00000586416 501 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 snoZ196.1-201ENST00000625269 89 ntBASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.15□□□□□ -2.23
TM9SF3Q9HD45 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 SNORD115-32-201ENST00000364079 82 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 RNA5SP259-201ENST00000365541 109 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 RNU6-950P-201ENST00000384651 107 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 MIR10B-201ENST00000385011 110 ntBASIC1.14□□□□□ -2.23
TM9SF3Q9HD45 MIR153-2-201ENST00000385225 87 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms