Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL355073.2-201ENST00000612106 557 ntBASIC0.07□□□□□ -2.4
KIAA1549Q9HCM3 RNA5SP264-201ENST00000363115 107 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-376P-201ENST00000384731 106 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 SNORD41-201ENST00000386967 70 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC016909.1-201ENST00000415916 166 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 snoU13.21-201ENST00000459368 105 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-1096P-201ENST00000517089 102 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-323P-201ENST00000521915 107 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC104576.1-201ENST00000524225 88 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC023827.1-201ENST00000569247 97 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 MIR4703-201ENST00000577728 79 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 MIR4305-201ENST00000583252 102 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC025449.1-201ENST00000603896 529 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC092634.7-201ENST00000621022 103 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC006504.8-201ENST00000621046 635 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 SNORA9.1-201ENST00000362412 131 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 SNORD115-8-201ENST00000363856 82 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNY4P34-201ENST00000364779 95 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-1303P-201ENST00000364841 107 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 SNORD115-38-201ENST00000365037 82 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNU5E-5P-201ENST00000365379 116 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 MIR526A1-201ENST00000384897 85 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 MIR520C-201ENST00000385005 87 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 MIR1185-2-201ENST00000408687 86 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 MTCO2P34-201ENST00000421994 607 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC104850.1-201ENST00000435940 476 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 snoU13.6-201ENST00000458785 104 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 SNORD65B-201ENST00000459126 73 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC091133.4-201ENST00000511142 308 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNU2-69P-201ENST00000516061 100 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNU4-49P-201ENST00000516080 140 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 MIR5589-201ENST00000579442 60 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AP000811.1-201ENST00000603803 651 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC006566.1-201ENST00000608943 513 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC017083.3-201ENST00000609955 700 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AL078595.3-201ENST00000623815 1166 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 AC006435.5-201ENST00000624486 112 ntBASIC0.06□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AL593851.1-201ENST00000426171 157 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AL606489.2-201ENST00000433886 234 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 PCNPP5-201ENST00000452246 481 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AC108740.1-201ENST00000498629 225 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 SCARNA24.1-201ENST00000516465 137 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-58P-201ENST00000517143 103 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AC104383.1-201ENST00000530297 370 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AC027288.2-201ENST00000553028 243 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 MIR4775-201ENST00000581168 75 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AC018645.2-201ENST00000609151 472 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 Z98949.2-201ENST00000440996 144 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 MTATP6P14-201ENST00000455189 673 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AP003461.1-201ENST00000528866 78 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AC234772.3-201ENST00000602277 528 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 AC009161.2-201ENST00000624626 138 ntBASIC0.05□□□□□ -2.4
KIAA1549Q9HCM3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-727P-201ENST00000363592 107 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-169P-201ENST00000365336 107 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-456P-201ENST00000384493 107 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 MIR520G-201ENST00000385064 90 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 MIR520H-201ENST00000385126 88 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 SNORA40.4-201ENST00000390971 128 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 AL035398.1-201ENST00000430869 322 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 AL392103.1-201ENST00000447000 198 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 MTND4P18-201ENST00000447010 465 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 AL033528.1-201ENST00000453780 140 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 RNU2-46P-201ENST00000517038 113 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 AC027419.1-201ENST00000522976 328 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 AC023157.2-201ENST00000540596 141 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 AC022523.2-201ENST00000561045 150 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 AL136317.1-201ENST00000612653 226 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.04□□□□□ -2.4
KIAA1549Q9HCM3 MTND5P16-201ENST00000460269 1703 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 SNORA1B-201ENST00000362535 133 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 RNU6-903P-201ENST00000391270 109 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 RNU2-29P-201ENST00000410423 189 ntBASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.03□□□□□ -2.4
KIAA1549Q9HCM3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms