Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL109918.3-201ENST00000603072 338 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 SNORD113-5-201ENST00000607261 78 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 AC011373.1-201ENST00000607270 237 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 AC004467.1-201ENST00000615678 330 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 MIR7843-201ENST00000622274 79 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 MIR3674-201ENST00000636576 68 ntBASIC2.46□□□□□ -2.02
USP29Q9HBJ7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.46□□□□□ -2.02
USP29Q9HBJ7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.46□□□□□ -2.02
USP29Q9HBJ7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
USP29Q9HBJ7 MIR335-201ENST00000362173 94 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.14-201ENST00000362415 103 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 U3.8-201ENST00000363675 217 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 MIR504-201ENST00000385065 83 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 MIR1283-1-201ENST00000408494 87 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 AC009963.1-201ENST00000417265 157 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.45□□□□□ -2.02
USP29Q9HBJ7 RNU7-26P-201ENST00000458980 63 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 HMGB3P17-201ENST00000504195 649 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 RNU6-237P-201ENST00000515985 71 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 RNU6-1338P-201ENST00000516328 91 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 AC110588.1-201ENST00000559699 137 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 MIR1291-201ENST00000627649 87 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 U6.104-201ENST00000637979 90 ntBASIC2.45□□□□□ -2.02
USP29Q9HBJ7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USP29Q9HBJ7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USP29Q9HBJ7 RNU4-90P-201ENST00000362773 141 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.237-201ENST00000364439 102 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 SNORD31B-201ENST00000364977 69 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 RNU6-1310P-201ENST00000384153 107 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.446-201ENST00000384178 104 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.44□□□□□ -2.02
USP29Q9HBJ7 HMGN2P18-201ENST00000450680 270 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 AC016925.1-201ENST00000458303 298 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 snoU13.26-201ENST00000459452 105 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 AC026436.1-201ENST00000510537 270 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 RNU7-110P-201ENST00000516891 62 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 RNU2-12P-201ENST00000517216 168 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 DEFB108E-201ENST00000524692 240 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 AC012433.1-201ENST00000588916 398 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.44□□□□□ -2.02
USP29Q9HBJ7 AL355297.2-201ENST00000604792 129 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 AL590240.4-201ENST00000616908 390 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.44□□□□□ -2.02
USP29Q9HBJ7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USP29Q9HBJ7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
USP29Q9HBJ7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USP29Q9HBJ7 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 SNORA38-201ENST00000363946 132 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.188-201ENST00000363952 111 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 RNU6-290P-201ENST00000365212 101 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.350-201ENST00000365409 98 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.447-201ENST00000384184 113 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 MIR300-201ENST00000401138 83 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 RPL23AP3-201ENST00000453844 468 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 CKS1BP2-201ENST00000497342 240 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 RNU6-107P-201ENST00000516643 102 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.43□□□□□ -2.02
USP29Q9HBJ7 AC103810.6-201ENST00000606708 136 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.43□□□□□ -2.02
USP29Q9HBJ7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
USP29Q9HBJ7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.43□□□□□ -2.02
USP29Q9HBJ7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USP29Q9HBJ7 MTND5P6-201ENST00000422338 1798 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 AL391987.6-201ENST00000305671 199 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
USP29Q9HBJ7 Y_RNA.331-201ENST00000365267 102 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 MIR561-201ENST00000385216 97 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
USP29Q9HBJ7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 RNU2-54P-201ENST00000410299 190 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 RNA5SP475-201ENST00000410568 110 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 TOMM22P2-201ENST00000430735 237 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 AC005042.3-201ENST00000453230 174 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 RN7SL636P-201ENST00000497504 294 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 RNU6-1271P-201ENST00000517049 105 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 IGKV3-31-201ENST00000523109 329 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.42□□□□□ -2.02
USP29Q9HBJ7 MIR4524B-201ENST00000581569 115 ntBASIC2.42□□□□□ -2.02
USP29Q9HBJ7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.42□□□□□ -2.02
USP29Q9HBJ7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
USP29Q9HBJ7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
USP29Q9HBJ7 AC092881.1-201ENST00000638218 2733 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.41□□□□□ -2.02
USP29Q9HBJ7 SNORA72.2-201ENST00000365028 127 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 RNU6-975P-201ENST00000384296 105 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 RNU6-21P-201ENST00000384710 107 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 MIR1185-2-201ENST00000408687 86 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 RPL23AP36-201ENST00000413895 458 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 Z98742.3-201ENST00000418637 326 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 AC018634.1-201ENST00000437554 401 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 snoU13.15-201ENST00000459407 104 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 AC234781.5-201ENST00000508429 271 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 IGLV3-17-201ENST00000519099 244 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 MIR5194-201ENST00000582634 120 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 AC008749.1-201ENST00000597650 306 ntBASIC2.41□□□□□ -2.02
USP29Q9HBJ7 AC046143.2-201ENST00000609789 160 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms