Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC126177.8-201ENST00000618339 1015 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AC092794.2-201ENST00000620933 563 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AL078596.1-201ENST00000624856 447 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 snoZ196.1-201ENST00000625269 89 ntBASIC1.52□□□□□ -2.17
RNF41Q9H4P4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
RNF41Q9H4P4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.52□□□□□ -2.17
RNF41Q9H4P4 AL391987.6-201ENST00000305671 199 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 U3.8-201ENST00000363675 217 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.179-201ENST00000363844 90 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 RNU6-1145P-201ENST00000384246 107 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 SNORA75.6-201ENST00000391318 127 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 USP9YP16-201ENST00000430287 407 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 USP9YP23-201ENST00000455085 407 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 MTCO3P10-201ENST00000455912 772 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.51□□□□□ -2.17
RNF41Q9H4P4 AC090617.3-201ENST00000573670 475 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 MIR4498-201ENST00000577599 66 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 MIR5695-201ENST00000579717 85 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 AC010999.1-201ENST00000611856 324 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 AL157834.3-201ENST00000615543 103 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.51□□□□□ -2.17
RNF41Q9H4P4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.51□□□□□ -2.17
RNF41Q9H4P4 MTND5P35-201ENST00000557537 1720 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 RNU6-318P-201ENST00000384283 103 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 SNORD116-29-201ENST00000384516 83 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 RNU6-700P-201ENST00000391043 107 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RNF41Q9H4P4 RNU6-57P-201ENST00000411348 103 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 HMGN2P34-201ENST00000437647 269 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.5□□□□□ -2.17
RNF41Q9H4P4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 AL117351.2-201ENST00000513571 157 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 SNORA31.17-201ENST00000516953 127 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.5□□□□□ -2.17
RNF41Q9H4P4 AC068338.1-201ENST00000565567 176 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 FRG2DP-202ENST00000566967 323 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 MIR5690-201ENST00000583739 73 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RNF41Q9H4P4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.5□□□□□ -2.17
RNF41Q9H4P4 AL357075.2-201ENST00000614906 189 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.5□□□□□ -2.17
RNF41Q9H4P4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.49□□□□□ -2.17
RNF41Q9H4P4 SNORA33-201ENST00000363664 130 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 RNU1-96P-201ENST00000364163 162 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 SNORA63D-201ENST00000364359 132 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 RNU6-99P-201ENST00000364721 107 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 RNU6-1001P-201ENST00000411265 100 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 ELOCP21-201ENST00000412558 336 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.49□□□□□ -2.17
RNF41Q9H4P4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.49□□□□□ -2.17
RNF41Q9H4P4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 RNU6-507P-201ENST00000516045 100 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 RNU6-559P-201ENST00000516151 98 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.49□□□□□ -2.17
RNF41Q9H4P4 AC091144.1-201ENST00000519573 138 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 AC084364.2-201ENST00000546924 395 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 AC093023.1-201ENST00000547375 507 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 AC087588.2-201ENST00000617667 426 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 U6.108-201ENST00000637764 58 ntBASIC1.49□□□□□ -2.17
RNF41Q9H4P4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.358-201ENST00000365491 99 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.387-201ENST00000383918 102 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 RNU6-890P-201ENST00000384121 107 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RNF41Q9H4P4 CST2P1-201ENST00000425770 87 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 AC092473.1-201ENST00000441098 221 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.48□□□□□ -2.17
RNF41Q9H4P4 ELOCP24-201ENST00000456370 334 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 RPL36AP21-201ENST00000490372 323 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.48□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.683-201ENST00000516508 93 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.48□□□□□ -2.17
RNF41Q9H4P4 AC004584.2-201ENST00000570407 410 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 MIR548S-201ENST00000581352 82 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 AC073413.2-201ENST00000604332 360 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 MIR1244-1-201ENST00000612829 85 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 AC104260.1-201ENST00000616660 539 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 AC006001.4-201ENST00000622243 395 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 MIR1244-3-201ENST00000635744 85 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 MTND4LP32-201ENST00000636111 270 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 MIR1244-2-201ENST00000636449 85 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 MIR1244-4-202ENST00000636813 85 ntBASIC1.48□□□□□ -2.17
RNF41Q9H4P4 AC010615.1-201ENST00000594254 1764 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 MIR126-201ENST00000362291 85 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 RNA5SP361-201ENST00000362686 118 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 RNU5F-3P-201ENST00000363767 117 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.577-201ENST00000384794 101 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.47□□□□□ -2.17
RNF41Q9H4P4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.47□□□□□ -2.17
RNF41Q9H4P4 MTND5P20-201ENST00000448677 143 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 AC108729.3-201ENST00000513484 108 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 RNU6-470P-201ENST00000515954 104 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 RNU6-307P-201ENST00000516743 106 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 Y_RNA.718-201ENST00000517110 102 ntBASIC1.47□□□□□ -2.17
RNF41Q9H4P4 RNA5SP437-201ENST00000517249 129 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms