Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 HMGN2P26-201ENST00000463169 339 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 AC091021.1-201ENST00000468051 388 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 AC010469.2-201ENST00000496412 480 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 RNU6-1198P-201ENST00000516904 67 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 MTND4LP26-201ENST00000518144 282 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 AC023827.1-201ENST00000569247 97 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.3□□□□□ -2.36
VCX3BQ9H321 AC131055.1-201ENST00000584626 316 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 AC016727.1-205ENST00000605437 569 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
VCX3BQ9H321 AC244015.1-201ENST00000622301 99 ntBASIC0.3□□□□□ -2.36
VCX3BQ9H321 Y_RNA.330-201ENST00000365230 109 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 RNU6-38P-201ENST00000384085 107 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 RNU6-793P-201ENST00000384233 104 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 MIR562-201ENST00000384894 95 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 MIR153-2-201ENST00000385225 87 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
VCX3BQ9H321 AL590002.1-201ENST00000406554 418 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 MTCO3P19-201ENST00000415864 321 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.29□□□□□ -2.36
VCX3BQ9H321 AL606489.2-201ENST00000433886 234 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 AL445567.1-201ENST00000439121 144 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 DAP3P1-201ENST00000441522 278 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.29□□□□□ -2.36
VCX3BQ9H321 U7.7-201ENST00000459276 60 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 RNU6-1208P-201ENST00000459588 107 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.29□□□□□ -2.36
VCX3BQ9H321 TRMT112P2-201ENST00000512910 132 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 RNA5SP458-201ENST00000516188 119 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 RNU6-1332P-201ENST00000516666 104 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 RNU6-341P-201ENST00000516973 96 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.29□□□□□ -2.36
VCX3BQ9H321 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.29□□□□□ -2.36
VCX3BQ9H321 AP002004.2-201ENST00000531656 154 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.29□□□□□ -2.36
VCX3BQ9H321 MIR4524B-201ENST00000581569 115 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.29□□□□□ -2.36
VCX3BQ9H321 AC091178.2-201ENST00000584401 117 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.29□□□□□ -2.36
VCX3BQ9H321 7SK.7-201ENST00000603504 247 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 AC092807.2-201ENST00000609367 243 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 AL158209.2-201ENST00000619266 216 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 7SK.10-201ENST00000621414 298 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 AC068137.4-201ENST00000638485 296 ntBASIC0.29□□□□□ -2.36
VCX3BQ9H321 RNA5SP264-201ENST00000363115 107 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 SNORD113-7-201ENST00000363762 77 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 Y_RNA.184-201ENST00000363884 108 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RNU4-66P-201ENST00000365199 138 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 Y_RNA.336-201ENST00000365307 109 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RNY1P8-201ENST00000383970 114 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RNU6-348P-201ENST00000384386 107 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RNU6-163P-201ENST00000384396 106 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 SNORD89-201ENST00000390981 114 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RNA5SP482-201ENST00000391269 118 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 Z82205.1-201ENST00000428456 297 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AL162725.1-201ENST00000435405 301 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RNU7-187P-201ENST00000458985 68 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AP000870.1-201ENST00000472927 406 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AC010598.1-201ENST00000510378 103 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RNA5SP401-201ENST00000515920 127 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RN7SKP287-201ENST00000516546 266 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RNU7-172P-201ENST00000517125 64 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 RNU6-1116P-201ENST00000517269 99 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AC091144.1-201ENST00000519573 138 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AP003716.2-201ENST00000528260 108 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AC109810.1-201ENST00000534066 224 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 UBL5P4-201ENST00000562584 236 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AC025627.3-201ENST00000582078 182 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 FAM106DP-201ENST00000586416 501 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AC093424.1-201ENST00000604999 338 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AL603755.1-201ENST00000619504 163 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 AL008636.1-201ENST00000625038 1018 ntBASIC0.28□□□□□ -2.36
VCX3BQ9H321 MIR103A2-201ENST00000362154 78 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 RNA5SP347-201ENST00000362445 119 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 RNA5SP499-201ENST00000363982 119 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 Y_RNA.267-201ENST00000364679 109 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 SNORA72.3-201ENST00000365074 132 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 EIF4E2P1-201ENST00000393781 255 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC244098.3-201ENST00000424803 96 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 RPL23AP50-201ENST00000434149 455 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC093019.1-201ENST00000443135 252 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC107401.1-201ENST00000503426 685 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC093303.1-201ENST00000514549 295 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC011604.1-201ENST00000545978 196 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 CYP3A137P-201ENST00000562436 69 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.27□□□□□ -2.37
VCX3BQ9H321 PIGPP4-201ENST00000584447 307 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC010620.1-201ENST00000601088 1102 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 RNU6-94P-201ENST00000607728 107 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC024933.1-201ENST00000608472 348 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.27□□□□□ -2.37
VCX3BQ9H321 AL158063.1-201ENST00000615349 536 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC007014.2-201ENST00000615581 479 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 SEPT14P17-201ENST00000617978 177 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 AC006504.8-201ENST00000621046 635 ntBASIC0.27□□□□□ -2.37
VCX3BQ9H321 Y_RNA.169-201ENST00000363745 96 ntBASIC0.26□□□□□ -2.37
VCX3BQ9H321 RNU6-280P-201ENST00000364145 104 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms