Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RRN3P3-201ENST00000549207 578 ntBASIC1.47□□□□□ -2.17
CCSER1Q9C0I3 SNORA77B-201ENST00000578179 125 ntBASIC1.47□□□□□ -2.17
CCSER1Q9C0I3 MIR5701-3-201ENST00000578890 82 ntBASIC1.47□□□□□ -2.17
CCSER1Q9C0I3 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
CCSER1Q9C0I3 MIR5701-1-201ENST00000585138 82 ntBASIC1.47□□□□□ -2.17
CCSER1Q9C0I3 AL359821.1-201ENST00000605519 182 ntBASIC1.47□□□□□ -2.17
CCSER1Q9C0I3 MIR5701-2-201ENST00000615634 82 ntBASIC1.47□□□□□ -2.17
CCSER1Q9C0I3 AC112487.2-201ENST00000637950 304 ntBASIC1.47□□□□□ -2.17
CCSER1Q9C0I3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 RNU1-62P-201ENST00000362599 164 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 SNORA72.1-201ENST00000363485 129 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 SNORA63D-201ENST00000364359 132 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 RNU6-541P-201ENST00000384709 110 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 MIR150-201ENST00000385048 84 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 RNU6-159P-201ENST00000391080 106 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 AC004965.1-201ENST00000413033 213 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 AC245047.4-201ENST00000433189 144 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 Y_RNA.635-201ENST00000459041 101 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 AC004223.1-201ENST00000479840 271 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 AL163540.1-201ENST00000485382 386 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 RNU6-875P-201ENST00000516488 106 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 RAB11AP2-201ENST00000545905 639 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 AL160236.1-201ENST00000556317 195 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 UBE2V2P2-201ENST00000587677 504 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 AC100812.1-201ENST00000607622 580 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 AC005014.2-201ENST00000607795 599 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 PISRT1.1-201ENST00000616930 107 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 AC100821.1-201ENST00000523153 2479 ntBASIC1.46□□□□□ -2.18
CCSER1Q9C0I3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 Y_RNA.404-201ENST00000383978 102 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 RNU6-418P-201ENST00000384035 107 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 MIR586-201ENST00000385035 97 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 SNORA75.4-201ENST00000391278 119 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 Y_RNA.604-201ENST00000410574 102 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 RNU6-321P-201ENST00000410912 106 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 SDAD1P3-201ENST00000427380 333 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 RPS26P55-201ENST00000471178 356 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 RPL7P42-201ENST00000481005 679 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 RNA5SP384-201ENST00000516615 116 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 Y_RNA.706-201ENST00000516933 99 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 AC105029.1-201ENST00000520250 669 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 AL121579.1-201ENST00000555129 305 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 AC005730.3-201ENST00000583067 366 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 AC005899.2-201ENST00000584353 90 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 AL117336.2-201ENST00000602435 335 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 AL355802.3-201ENST00000607571 545 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 AC025253.1-201ENST00000613623 543 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 AL121890.5-201ENST00000620848 304 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 MIR8063-201ENST00000621930 81 ntBASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
CCSER1Q9C0I3 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 Y_RNA.58-201ENST00000362807 102 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 RNY1P16-201ENST00000363063 111 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 Y_RNA.142-201ENST00000363491 102 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 Y_RNA.154-201ENST00000363624 102 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 RNU6-873P-201ENST00000363833 107 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 RNU6-271P-201ENST00000363858 105 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 RNU6-280P-201ENST00000364145 104 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 RNY3P1-201ENST00000365085 102 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 RNY3-201ENST00000365484 102 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 SNORA67.2-201ENST00000384300 149 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 SNORD116-29-201ENST00000384516 83 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 Y_RNA.529-201ENST00000384586 119 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 SNORA40.6-201ENST00000391153 128 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 HMGN2P9-201ENST00000476875 229 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 AC079140.2-201ENST00000506193 142 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 SNORA25.14-201ENST00000516481 132 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 RNU6-307P-201ENST00000516743 106 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 MIR548S-201ENST00000581352 82 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 AC008873.1-201ENST00000625051 138 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 MTND4P29-201ENST00000503122 1372 ntBASIC1.44□□□□□ -2.18
CCSER1Q9C0I3 AL391987.6-201ENST00000305671 199 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 RNU5F-3P-201ENST00000363767 117 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 RNU6-975P-201ENST00000384296 105 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 Y_RNA.509-201ENST00000384506 99 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 RNU6-331P-201ENST00000384724 107 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 MIR10B-201ENST00000385011 110 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 RNU6-700P-201ENST00000391043 107 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 MIR190B-201ENST00000401119 79 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 COX6CP10-201ENST00000416832 224 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 RPL30P13-201ENST00000418873 348 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 AC060773.1-201ENST00000421698 310 ntBASIC1.43□□□□□ -2.18
CCSER1Q9C0I3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 2270 ms