Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC022254.1-201ENST00000567857 235 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 AC125232.2-201ENST00000592457 143 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 AC010615.1-201ENST00000594254 1764 ntBASIC2.2□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-112P-201ENST00000363599 104 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.431-201ENST00000384086 102 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-417P-201ENST00000384712 107 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 MIR515-2-201ENST00000384883 83 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 MIR515-1-201ENST00000384884 83 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 MIR329-1-201ENST00000385028 80 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 SNORA69.1-201ENST00000390904 137 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-308P-201ENST00000390957 107 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 AL117342.1-201ENST00000404861 406 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.605-201ENST00000410577 105 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 MTCO2P27-201ENST00000420740 428 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 AL137792.2-201ENST00000443484 235 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 MTCO3P10-201ENST00000455912 772 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-120P-201ENST00000516077 103 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 SNORA31.17-201ENST00000516953 127 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 MIR2355-201ENST00000517199 87 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 GNAI2P1-201ENST00000541815 315 ntBASIC2.19□□□□□ -2.06
HERPUD2Q9BSE4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 SNORA72.2-201ENST00000365028 127 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-463P-201ENST00000384340 107 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 RNA5SP323-201ENST00000391094 133 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 RNA5SP489-201ENST00000410986 109 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 AC069257.2-201ENST00000441819 155 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.631-201ENST00000459607 101 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 RPS29P21-201ENST00000496272 170 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 RNU7-4P-201ENST00000516961 62 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 AC144568.1-201ENST00000520139 137 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 AC084364.2-201ENST00000546924 395 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 AK6P2-201ENST00000549020 471 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 MIR4503-201ENST00000582187 83 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 AC008737.2-201ENST00000599446 118 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 AC090971.5-201ENST00000621102 293 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 AC092881.1-201ENST00000638218 2733 ntBASIC2.18□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.5-201ENST00000362334 102 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.145-201ENST00000363527 102 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.197-201ENST00000364004 102 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 RNU6-1145P-201ENST00000384246 107 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 SNORA51.11-201ENST00000384442 131 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 RNY4P36-201ENST00000391116 96 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 MIR548F4-201ENST00000408515 105 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 PCNPP5-201ENST00000452246 481 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 AC112492.4-201ENST00000456549 352 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 U8.22-201ENST00000459141 133 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 SNRPGP19-201ENST00000603826 189 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 AC080078.3-201ENST00000605407 463 ntBASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.17□□□□□ -2.06
HERPUD2Q9BSE4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 RNA5SP361-201ENST00000362686 118 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 MIR1261-201ENST00000408659 82 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 AC016909.1-201ENST00000415916 166 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 TOMM22P2-201ENST00000430735 237 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 AC236972.2-201ENST00000434979 310 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 ELOCP24-201ENST00000456370 334 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 RPL36AP21-201ENST00000490372 323 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 RN7SKP49-201ENST00000516675 260 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 SNORA44.1-201ENST00000517031 108 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 IGKV3-31-201ENST00000523109 329 ntBASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
HERPUD2Q9BSE4 MTND4P1-201ENST00000457501 1466 ntBASIC2.15□□□□□ -2.06
HERPUD2Q9BSE4 Y_RNA.148-201ENST00000363557 117 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.193-201ENST00000363979 102 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.287-201ENST00000364853 94 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 SNORA67.3-201ENST00000384366 140 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.498-201ENST00000384460 102 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 AL121890.1-201ENST00000435457 205 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 AC074133.1-201ENST00000515696 183 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 AC006504.6-201ENST00000590142 199 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 AC016925.2-201ENST00000605108 242 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.28-201ENST00000362554 111 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-490P-201ENST00000362985 107 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.112-201ENST00000363250 102 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 Y_RNA.202-201ENST00000364083 110 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-505P-201ENST00000384427 107 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 RNU6-296P-201ENST00000384608 107 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 RNU2-2P-201ENST00000410396 191 ntBASIC2.14□□□□□ -2.07
HERPUD2Q9BSE4 AC018865.2-201ENST00000423631 129 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 269.8 ms