Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 AC072026.1-201ENST00000605023 201 ntBASIC2.58□□□□□ -2
SH2D3AQ9BRG2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
SH2D3AQ9BRG2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.58□□□□□ -2
SH2D3AQ9BRG2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 RNU6-655P-201ENST00000362858 107 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 RNU6-47P-201ENST00000383866 107 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 RNU6-1310P-201ENST00000384153 107 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 RNU6-1289P-201ENST00000384431 106 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 RNU6-918P-201ENST00000391219 106 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 POLR2KP2-201ENST00000438155 177 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 MRPS36P2-201ENST00000512569 299 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 RNU6-191P-201ENST00000516295 94 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 RNY3P16-201ENST00000516338 101 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 RNU2-12P-201ENST00000517216 168 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 AC024405.2-202ENST00000532731 184 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 AC004467.1-201ENST00000615678 330 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 AC073349.3-201ENST00000617616 186 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 AC007336.1-201ENST00000576365 3828 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.57□□□□□ -2
SH2D3AQ9BRG2 ZNF658B-202ENST00000615961 3375 ntBASIC2.57□□□□□ -2
SH2D3AQ9BRG2 SNORA67.2-201ENST00000384300 149 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 Y_RNA.498-201ENST00000384460 102 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 RNA5SP504-201ENST00000410676 117 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 RN7SKP51-201ENST00000410781 304 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 AC007064.1-201ENST00000412238 351 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 COX6CP10-201ENST00000416832 224 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 Z98742.2-201ENST00000431564 187 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.56□□□□□ -2
SH2D3AQ9BRG2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.56□□□□□ -2
SH2D3AQ9BRG2 SCARNA17.1-201ENST00000516211 143 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 SCARNA17.2-201ENST00000516334 143 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 DEFB131C-201ENST00000528817 165 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SH2D3AQ9BRG2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.56□□□□□ -2
SH2D3AQ9BRG2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.56□□□□□ -2
SH2D3AQ9BRG2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
SH2D3AQ9BRG2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 AC006001.4-201ENST00000622243 395 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 AC091932.3-201ENST00000624223 323 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 U6.106-201ENST00000636360 105 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 AC016717.2-201ENST00000609089 5141 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 AL359854.1-201ENST00000614203 1594 ntBASIC2.56□□□□□ -2
SH2D3AQ9BRG2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.56□□□□□ -2
SH2D3AQ9BRG2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.56□□□□□ -2
SH2D3AQ9BRG2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SH2D3AQ9BRG2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 Y_RNA.240-201ENST00000364469 95 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 Y_RNA.304-201ENST00000365011 112 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 Y_RNA.361-201ENST00000365515 120 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 MIR627-201ENST00000384979 97 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 Y_RNA.590-201ENST00000410140 107 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 RPS12P2-201ENST00000439728 269 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 RAC1P5-201ENST00000512182 576 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 RNU6-789P-201ENST00000517105 102 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
SH2D3AQ9BRG2 TCL6_2.1-201ENST00000615162 119 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 UCA1.1-201ENST00000620952 75 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 MIR3674-201ENST00000636576 68 ntBASIC2.55□□□□□ -2
SH2D3AQ9BRG2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.54□□□□□ -2
SH2D3AQ9BRG2 RNU6-454P-201ENST00000364292 107 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 RNU6-1264P-201ENST00000383891 107 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 RNU6-514P-201ENST00000384208 107 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 AL139095.1-201ENST00000404326 391 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 MIR320B2-201ENST00000408479 138 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 AC097463.2-201ENST00000421074 142 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.54□□□□□ -2
SH2D3AQ9BRG2 EIF4EP4-201ENST00000424916 578 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.54□□□□□ -2
SH2D3AQ9BRG2 AC145146.1-201ENST00000496370 254 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 RNU6-861P-201ENST00000516745 106 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.54□□□□□ -2
SH2D3AQ9BRG2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.54□□□□□ -2
SH2D3AQ9BRG2 MIR5692C2-201ENST00000577959 77 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
SH2D3AQ9BRG2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SH2D3AQ9BRG2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SH2D3AQ9BRG2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
SH2D3AQ9BRG2 RNU6-653P-201ENST00000363074 106 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 U8.2-201ENST00000363156 134 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 RNU6-1020P-201ENST00000363684 107 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 U3.9-201ENST00000363823 204 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 RNU6-923P-201ENST00000364753 107 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 RNU6-187P-201ENST00000384139 106 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 MIR221-201ENST00000385135 110 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 SNORA12-201ENST00000391162 147 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 RN7SKP223-201ENST00000410582 62 ntBASIC2.53□□□□□ -2
SH2D3AQ9BRG2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.53□□□□□ -2
SH2D3AQ9BRG2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms