Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RNU6-74P-201ENST00000384235 107 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 MIR450B-201ENST00000401182 78 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 MIR1185-2-201ENST00000408687 86 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 RNA5SP95-201ENST00000410319 137 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 SNORD83.1-201ENST00000411362 77 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AC084290.1-201ENST00000434995 374 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AL512286.1-201ENST00000439244 400 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 snoU109.3-201ENST00000459477 145 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AC105417.1-201ENST00000514691 285 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 SNORA25.12-201ENST00000516202 82 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AP003716.2-201ENST00000528260 108 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AC023442.1-201ENST00000531247 422 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AC093027.1-201ENST00000546698 429 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AC027288.2-201ENST00000553028 243 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 HIF1AP1-201ENST00000553642 175 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 MIR4509-3-201ENST00000578671 94 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 MIR4509-2-201ENST00000583920 94 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 MIR4999-201ENST00000585029 91 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 MIR4509-1-201ENST00000618224 94 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AC015726.2-201ENST00000620112 122 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AC007671.2-201ENST00000637344 619 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 AC073544.1-201ENST00000600110 1595 ntBASIC-0.04□□□□□ -2.42
LYSMD1Q96S90 MIR18A-201ENST00000362310 71 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 RNU6-727P-201ENST00000363592 107 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 SNORA2B-201ENST00000384583 137 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 RNU6-679P-201ENST00000391003 106 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 MIR891A-201ENST00000401237 79 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 SNORD71-201ENST00000411292 86 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 ZNF885P-201ENST00000420174 1098 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 PIGPP3-201ENST00000425307 415 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 AC091133.4-201ENST00000511142 308 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 RN7SKP164-201ENST00000516138 266 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 SNORD27.1-201ENST00000516319 72 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 RNU7-28P-201ENST00000516759 62 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 MIR5190-201ENST00000581537 80 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 AC006927.3-201ENST00000638789 384 ntBASIC-0.05□□□□□ -2.42
LYSMD1Q96S90 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 SNORD113.3-201ENST00000364630 78 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 RNU6-815P-201ENST00000384080 113 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 MIR520C-201ENST00000385005 87 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 MIR520G-201ENST00000385064 90 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 MIR520H-201ENST00000385126 88 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 ZNF114P1-201ENST00000453500 292 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 HSFY5P-201ENST00000453726 309 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 RNU7-167P-201ENST00000459160 62 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AC005178.1-201ENST00000508392 440 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 RNU7-172P-201ENST00000517125 64 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 MTND1P5-201ENST00000517906 940 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AP001372.4-201ENST00000524889 472 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 MTND1P35-201ENST00000526739 508 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 MIR5583-1-201ENST00000580941 59 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 AP000240.1-201ENST00000609910 452 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 U2.17-201ENST00000611454 95 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 MIR2909-201ENST00000617113 69 ntBASIC-0.06□□□□□ -2.42
LYSMD1Q96S90 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 MIR516B2-201ENST00000385190 85 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 RNA5SP482-201ENST00000391269 118 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AL008987.1-201ENST00000415528 237 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AC093534.1-201ENST00000504977 132 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AC097462.1-201ENST00000514125 324 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AC104576.1-201ENST00000524225 88 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AP002004.2-201ENST00000531656 154 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AK6P2-201ENST00000549020 471 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 RPL21P9-201ENST00000556149 474 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 MTCO3P23-201ENST00000561363 289 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 EIF1P4-201ENST00000572664 335 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 MIR3612-201ENST00000579753 87 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AL158050.2-201ENST00000605336 568 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 AC104260.1-201ENST00000616660 539 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 OR5AK4P-201ENST00000635912 903 ntBASIC-0.07□□□□□ -2.42
LYSMD1Q96S90 RNA5SP457-201ENST00000363657 124 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 RNA5SP517-201ENST00000364724 117 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 MIR520F-201ENST00000384824 87 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 MIR518A1-201ENST00000385068 85 ntBASIC-0.08□□□□□ -2.42
LYSMD1Q96S90 SNORA40.4-201ENST00000390971 128 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms