Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-18P-201ENST00000384527 107 ntBASIC1.02□□□□□ -2.25
RPRD1AQ96P16 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RPRD1AQ96P16 RNU6-159P-201ENST00000391080 106 ntBASIC1.02□□□□□ -2.25
RPRD1AQ96P16 MIR1287-201ENST00000408492 90 ntBASIC1.02□□□□□ -2.25
RPRD1AQ96P16 RPL30P16-201ENST00000419341 429 ntBASIC1.02□□□□□ -2.25
RPRD1AQ96P16 AC098826.2-201ENST00000452011 651 ntBASIC1.02□□□□□ -2.25
RPRD1AQ96P16 ACA59.1-201ENST00000515966 143 ntBASIC1.02□□□□□ -2.25
RPRD1AQ96P16 RNU6-256P-201ENST00000516747 97 ntBASIC1.02□□□□□ -2.25
RPRD1AQ96P16 MIR3672-201ENST00000584290 82 ntBASIC1.02□□□□□ -2.25
RPRD1AQ96P16 AL021879.1-201ENST00000611756 288 ntBASIC1.02□□□□□ -2.25
RPRD1AQ96P16 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.02□□□□□ -2.25
RPRD1AQ96P16 MIR96-201ENST00000362288 78 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 Y_RNA.38-201ENST00000362617 102 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 RNU6-137P-201ENST00000363680 108 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 RNU6-793P-201ENST00000384233 104 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 Y_RNA.530-201ENST00000384587 101 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 RNU2-16P-201ENST00000410712 136 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.01□□□□□ -2.25
RPRD1AQ96P16 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 RNU6-922P-201ENST00000516753 99 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 MIR6504-201ENST00000613520 61 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 AL513423.1-201ENST00000621695 132 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 AC106754.2-201ENST00000623006 233 ntBASIC1.01□□□□□ -2.25
RPRD1AQ96P16 RNU6-1266P-201ENST00000362794 105 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 Y_RNA.100-201ENST00000363141 102 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 RNY3P3-201ENST00000363816 102 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 Y_RNA.212-201ENST00000364177 102 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 RNU6-541P-201ENST00000384709 110 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1□□□□□ -2.25
RPRD1AQ96P16 AL034345.1-201ENST00000407768 123 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 RAB28P5-201ENST00000427490 651 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1□□□□□ -2.25
RPRD1AQ96P16 MTND4P18-201ENST00000447010 465 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 MTND1P29-201ENST00000448112 647 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1□□□□□ -2.25
RPRD1AQ96P16 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1□□□□□ -2.25
RPRD1AQ96P16 PIGPP4-201ENST00000584447 307 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 AC124303.1-201ENST00000605703 360 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 AC019193.3-201ENST00000609144 554 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 AC073349.3-201ENST00000617616 186 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 SNORD3E-202ENST00000627253 216 ntBASIC1□□□□□ -2.25
RPRD1AQ96P16 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RPRD1AQ96P16 Y_RNA.191-201ENST00000363972 113 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 MIR660-201ENST00000385235 97 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 RNU6-332P-201ENST00000391193 108 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 ZNF885P-201ENST00000420174 1098 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 AC243428.1-201ENST00000421099 264 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.99□□□□□ -2.25
RPRD1AQ96P16 MTATP6P13-201ENST00000438531 667 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.99□□□□□ -2.25
RPRD1AQ96P16 SNORD65B-201ENST00000459126 73 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 CYCSP23-201ENST00000519781 313 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 MIR5696-201ENST00000578474 85 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 MIR4438-201ENST00000585271 93 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 NBR2-204ENST00000587322 63 ntBASIC0.99□□□□□ -2.25
RPRD1AQ96P16 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
RPRD1AQ96P16 RNU6-280P-201ENST00000364145 104 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 RNU6-1187P-201ENST00000364771 110 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 Y_RNA.414-201ENST00000384011 101 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 RNU6-306P-201ENST00000384617 107 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 MIR10B-201ENST00000385011 110 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 MRPS10P1-201ENST00000448483 130 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AP000870.1-201ENST00000472927 406 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AC093303.1-201ENST00000514549 295 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 SNORA31.2-201ENST00000516019 134 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AC091144.1-201ENST00000519573 138 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AC027419.1-201ENST00000522976 328 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AC023157.2-201ENST00000540596 141 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AC136932.1-201ENST00000574771 208 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 MIR4778-201ENST00000577635 80 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.98□□□□□ -2.25
RPRD1AQ96P16 MIR1321-201ENST00000637766 79 ntBASIC0.98□□□□□ -2.25
RPRD1AQ96P16 AC018630.2-201ENST00000534866 2403 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 Y_RNA.179-201ENST00000363844 90 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 Y_RNA.224-201ENST00000364308 111 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 RNU4-76P-201ENST00000364509 141 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 STAG3L5P-204ENST00000443759 179 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.97□□□□□ -2.25
RPRD1AQ96P16 MTND1P1-201ENST00000445453 368 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 RNU7-94P-201ENST00000459576 63 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
RPRD1AQ96P16 RNU6-113P-201ENST00000516653 101 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.97□□□□□ -2.25
RPRD1AQ96P16 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.97□□□□□ -2.25
RPRD1AQ96P16 APOOP3-201ENST00000536787 586 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 AL513534.2-201ENST00000603836 250 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
RPRD1AQ96P16 RNU6-1090P-201ENST00000364065 94 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 SNORD116-11-201ENST00000383882 92 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 Y_RNA.533-201ENST00000384596 114 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 SNORD41-201ENST00000386967 70 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 AC048334.1-201ENST00000477975 159 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 SNORA70.22-201ENST00000517160 124 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 AC134698.4-201ENST00000523451 826 ntBASIC0.96□□□□□ -2.26
RPRD1AQ96P16 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms