Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.31□□□□□ -2.04
CCDC138Q96M89 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.31□□□□□ -2.04
CCDC138Q96M89 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC138Q96M89 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC138Q96M89 RNU6-626P-201ENST00000363354 107 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 AC117470.1-201ENST00000381974 330 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 RNU6-417P-201ENST00000384712 107 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 RNA5SP212-201ENST00000391223 107 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC138Q96M89 MTND1P14-201ENST00000427400 950 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 MTCYBP6-201ENST00000441810 138 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 SNORD65B-201ENST00000459126 73 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 AC234781.5-201ENST00000508429 271 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 AP002001.1-203ENST00000534002 267 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 MIR5094-201ENST00000578766 85 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 AC022432.1-201ENST00000595739 310 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 AL356055.1-201ENST00000602528 446 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.3□□□□□ -2.04
CCDC138Q96M89 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCDC138Q96M89 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC138Q96M89 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCDC138Q96M89 SNORA72.2-201ENST00000365028 127 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 RNU6-20P-201ENST00000384106 107 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 Y_RNA.458-201ENST00000384240 102 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 MIR515-2-201ENST00000384883 83 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 MIR515-1-201ENST00000384884 83 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 MRPL42P3-201ENST00000401492 326 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 U3.40-201ENST00000408706 208 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC138Q96M89 AC079804.2-201ENST00000490376 200 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 AC010598.1-201ENST00000510378 103 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 RNU6-1153P-201ENST00000516760 105 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 Y_RNA.713-201ENST00000517013 96 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 AC069114.2-201ENST00000604699 304 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 AL773524.1-201ENST00000614065 229 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 AC004467.1-201ENST00000615678 330 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 AC006435.5-201ENST00000624486 112 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC138Q96M89 ZNF720P1-201ENST00000562403 1939 ntBASIC2.29□□□□□ -2.04
CCDC138Q96M89 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CCDC138Q96M89 RNU6-454P-201ENST00000364292 107 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 Y_RNA.287-201ENST00000364853 94 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 SNORA8-201ENST00000384574 139 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC138Q96M89 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC138Q96M89 U8.20-201ENST00000459445 131 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC138Q96M89 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 Y_RNA.721-201ENST00000517207 102 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 AC022616.4-201ENST00000522985 181 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 AL137100.2-201ENST00000555786 315 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 SUB1P4-201ENST00000566062 339 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 SNORD53-201ENST00000579969 78 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 AC005176.2-201ENST00000596933 147 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 AC005034.5-201ENST00000604219 466 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 AC124312.5-201ENST00000604451 268 ntBASIC2.28□□□□□ -2.04
CCDC138Q96M89 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC138Q96M89 Y_RNA.230-201ENST00000364348 109 ntBASIC2.27□□□□□ -2.05
CCDC138Q96M89 RNU6-1019P-201ENST00000364424 107 ntBASIC2.27□□□□□ -2.05
CCDC138Q96M89 SNORA70B-201ENST00000384210 135 ntBASIC2.27□□□□□ -2.05
CCDC138Q96M89 Y_RNA.645-201ENST00000391229 102 ntBASIC2.27□□□□□ -2.05
CCDC138Q96M89 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC138Q96M89 RNA5SP57-201ENST00000459463 123 ntBASIC2.27□□□□□ -2.05
CCDC138Q96M89 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC138Q96M89 MIR5007-201ENST00000583098 95 ntBASIC2.27□□□□□ -2.05
CCDC138Q96M89 AC091932.3-201ENST00000624223 323 ntBASIC2.27□□□□□ -2.05
CCDC138Q96M89 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC138Q96M89 Y_RNA.216-201ENST00000364205 93 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 Y_RNA.439-201ENST00000384119 94 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 RNU4-52P-201ENST00000384209 138 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 Y_RNA.471-201ENST00000384312 102 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 Y_RNA.551-201ENST00000384661 102 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 AL079342.1-201ENST00000401460 267 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 RNU6-101P-201ENST00000410323 104 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 RPL23AP6-201ENST00000446637 472 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 SUMO1P2-201ENST00000452524 304 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 RPS27P21-201ENST00000486977 252 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC138Q96M89 AC008749.1-201ENST00000597650 306 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.26□□□□□ -2.05
CCDC138Q96M89 AC104695.3-201ENST00000604052 296 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 SDR42E1P4-201ENST00000620894 481 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 U6.115-201ENST00000636045 103 ntBASIC2.26□□□□□ -2.05
CCDC138Q96M89 Y_RNA.158-201ENST00000363651 101 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 SNORA63.7-201ENST00000365579 123 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 Y_RNA.389-201ENST00000383924 113 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 SNORA20B-201ENST00000384220 132 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AC244636.1-201ENST00000421152 228 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 RPS15AP28-201ENST00000435088 386 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AC018634.1-201ENST00000437554 401 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC138Q96M89 snoU13.26-201ENST00000459452 105 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 Y_RNA.673-201ENST00000516306 88 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AC024995.1-201ENST00000523014 93 ntBASIC2.25□□□□□ -2.05
CCDC138Q96M89 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.25□□□□□ -2.05
CCDC138Q96M89 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 190.4 ms