Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 RNU1-148P-201ENST00000384472 162 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 Y_RNA.539-201ENST00000384635 107 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 SNORD58.1-201ENST00000391313 66 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 AC016909.1-201ENST00000415916 166 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 AC108059.2-201ENST00000434626 151 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.55□□□□□ -2
CLPTM1LQ96KA5 AP001486.1-201ENST00000463339 476 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLPTM1LQ96KA5 SNORA70.12-201ENST00000516084 153 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 RNU6-794P-201ENST00000517261 64 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 AC022080.3-201ENST00000544433 482 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 AC026271.5-201ENST00000577873 130 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.55□□□□□ -2
CLPTM1LQ96KA5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CLPTM1LQ96KA5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CLPTM1LQ96KA5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CLPTM1LQ96KA5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.54□□□□□ -2
CLPTM1LQ96KA5 Y_RNA.275-201ENST00000364726 110 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 RNU6-1318P-201ENST00000365389 103 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 Y_RNA.552-201ENST00000384665 112 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLPTM1LQ96KA5 MIR873-201ENST00000401120 77 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 RNU6-710P-201ENST00000410424 105 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 RN7SKP284-201ENST00000411002 343 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.54□□□□□ -2
CLPTM1LQ96KA5 AL121890.1-201ENST00000435457 205 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 RNU1-131P-201ENST00000458943 161 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 RNU6-111P-201ENST00000517179 105 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 AC090425.1-201ENST00000610007 140 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 AC006435.5-201ENST00000624486 112 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 SCARNA15.3-201ENST00000626315 122 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 SCARNA4.1-201ENST00000628597 123 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLPTM1LQ96KA5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CLPTM1LQ96KA5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.54□□□□□ -2
CLPTM1LQ96KA5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.54□□□□□ -2
CLPTM1LQ96KA5 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
CLPTM1LQ96KA5 SNORA27.1-201ENST00000362604 124 ntBASIC2.53□□□□□ -2
CLPTM1LQ96KA5 RNU6-271P-201ENST00000363858 105 ntBASIC2.53□□□□□ -2
CLPTM1LQ96KA5 RNU6-740P-201ENST00000364734 105 ntBASIC2.53□□□□□ -2
CLPTM1LQ96KA5 AC245102.2-201ENST00000448956 180 ntBASIC2.53□□□□□ -2
CLPTM1LQ96KA5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.53□□□□□ -2
CLPTM1LQ96KA5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
CLPTM1LQ96KA5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.53□□□□□ -2
CLPTM1LQ96KA5 MIR4643-201ENST00000577473 78 ntBASIC2.53□□□□□ -2
CLPTM1LQ96KA5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.53□□□□□ -2
CLPTM1LQ96KA5 AC141273.2-201ENST00000618989 130 ntBASIC2.53□□□□□ -2
CLPTM1LQ96KA5 AL159152.1-201ENST00000635019 2587 ntBASIC2.53□□□□□ -2.01
CLPTM1LQ96KA5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.53□□□□□ -2.01
CLPTM1LQ96KA5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2.01
CLPTM1LQ96KA5 SNORD114-6-201ENST00000364393 72 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 RNU6-338P-201ENST00000383888 105 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 RNU6-160P-201ENST00000384591 107 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 AC060773.1-201ENST00000421698 310 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 RPL23AP7-203ENST00000449021 469 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 MIR3126-201ENST00000577443 74 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 AL162424.1-201ENST00000602325 221 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.15-201ENST00000611544 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.16-201ENST00000613119 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 AC022202.1-201ENST00000613515 211 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.12-201ENST00000613778 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.20-201ENST00000613956 192 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.9-201ENST00000615427 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.11-201ENST00000616345 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.2-201ENST00000616535 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.3-201ENST00000617785 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.19-201ENST00000618602 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 RNU2-1-201ENST00000618664 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.6-201ENST00000619225 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.5-201ENST00000619465 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 U2.10-201ENST00000620268 191 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 AC078938.1-201ENST00000620993 318 ntBASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLPTM1LQ96KA5 Y_RNA.124-201ENST00000363339 93 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 Y_RNA.217-201ENST00000364214 105 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 Y_RNA.257-201ENST00000364596 102 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 RNU1-91P-201ENST00000364746 163 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 RNU6-662P-201ENST00000384253 104 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 COTL1P1-201ENST00000422309 375 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 Y_RNA.641-201ENST00000459414 105 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 SUMO2P18-201ENST00000518873 252 ntBASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.51□□□□□ -2.01
CLPTM1LQ96KA5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
CLPTM1LQ96KA5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CLPTM1LQ96KA5 Y_RNA.65-201ENST00000362846 100 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms