Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 SNORA16.1-201ENST00000364597 132 ntBASIC2.4□□□□□ -2.03
CCDC136Q96JN2 RNU4-42P-201ENST00000364738 142 ntBASIC2.4□□□□□ -2.03
CCDC136Q96JN2 RNU5E-4P-201ENST00000364931 120 ntBASIC2.4□□□□□ -2.03
CCDC136Q96JN2 RNU6-926P-201ENST00000384075 107 ntBASIC2.4□□□□□ -2.03
CCDC136Q96JN2 CHEK2P4-201ENST00000450340 246 ntBASIC2.4□□□□□ -2.03
CCDC136Q96JN2 PCNPP5-201ENST00000452246 481 ntBASIC2.4□□□□□ -2.03
CCDC136Q96JN2 RNU6-1146P-201ENST00000516282 102 ntBASIC2.4□□□□□ -2.03
CCDC136Q96JN2 AP002001.1-203ENST00000534002 267 ntBASIC2.4□□□□□ -2.03
CCDC136Q96JN2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC136Q96JN2 Y_RNA.146-201ENST00000363549 102 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 RNU6-867P-201ENST00000364956 107 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 TOMM22P2-201ENST00000430735 237 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 RNU6-625P-201ENST00000459412 107 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 AC144568.1-201ENST00000520139 137 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 AC103810.8-201ENST00000607347 118 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 AC138305.3-201ENST00000624988 240 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 AL008636.1-201ENST00000625038 1018 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 MIR219B-201ENST00000637023 88 ntBASIC2.39□□□□□ -2.03
CCDC136Q96JN2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC136Q96JN2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 AC010615.1-201ENST00000594254 1764 ntBASIC2.38□□□□□ -2.03
CCDC136Q96JN2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 Y_RNA.315-201ENST00000365117 102 ntBASIC2.38□□□□□ -2.03
CCDC136Q96JN2 RNU6-1264P-201ENST00000383891 107 ntBASIC2.38□□□□□ -2.03
CCDC136Q96JN2 Y_RNA.496-201ENST00000384444 101 ntBASIC2.38□□□□□ -2.03
CCDC136Q96JN2 Y_RNA.579-201ENST00000390939 94 ntBASIC2.38□□□□□ -2.03
CCDC136Q96JN2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 OOSP1P1-201ENST00000423265 274 ntBASIC2.38□□□□□ -2.03
CCDC136Q96JN2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 AC099799.1-201ENST00000439809 192 ntBASIC2.38□□□□□ -2.03
CCDC136Q96JN2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC136Q96JN2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.38□□□□□ -2.03
CCDC136Q96JN2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.37□□□□□ -2.03
CCDC136Q96JN2 RNU6-1266P-201ENST00000362794 105 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 RNU6-708P-201ENST00000384217 107 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 Y_RNA.498-201ENST00000384460 102 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 MIR520A-201ENST00000384862 85 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 RNU2-2P-201ENST00000410396 191 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 RAB28P5-201ENST00000427490 651 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 AL445646.1-201ENST00000431784 216 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 SNORD65B-201ENST00000459126 73 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 Y_RNA.661-201ENST00000516003 99 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 MIR2355-201ENST00000517199 87 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 CYCSP23-201ENST00000519781 313 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 GNAI2P1-201ENST00000541815 315 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC136Q96JN2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC136Q96JN2 DEFB122-202ENST00000569013 197 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 MIR4419B-201ENST00000577260 68 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 MIR4298-201ENST00000584380 73 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 U2.1-201ENST00000618978 145 ntBASIC2.37□□□□□ -2.03
CCDC136Q96JN2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC136Q96JN2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.36□□□□□ -2.03
CCDC136Q96JN2 RNA5SP323-201ENST00000391094 133 ntBASIC2.36□□□□□ -2.03
CCDC136Q96JN2 RNU2-7P-201ENST00000410794 178 ntBASIC2.36□□□□□ -2.03
CCDC136Q96JN2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC136Q96JN2 AL445685.2-201ENST00000422551 342 ntBASIC2.36□□□□□ -2.03
CCDC136Q96JN2 AC005002.2-201ENST00000438228 269 ntBASIC2.36□□□□□ -2.03
CCDC136Q96JN2 AC074133.1-201ENST00000515696 183 ntBASIC2.36□□□□□ -2.03
CCDC136Q96JN2 AC024614.2-201ENST00000577584 372 ntBASIC2.36□□□□□ -2.03
CCDC136Q96JN2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC136Q96JN2 Y_RNA.419-201ENST00000384041 102 ntBASIC2.35□□□□□ -2.03
CCDC136Q96JN2 Y_RNA.428-201ENST00000384078 102 ntBASIC2.35□□□□□ -2.03
CCDC136Q96JN2 MIR628-201ENST00000385229 95 ntBASIC2.35□□□□□ -2.03
CCDC136Q96JN2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC136Q96JN2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
CCDC136Q96JN2 HSPE1P9-201ENST00000440046 311 ntBASIC2.35□□□□□ -2.03
CCDC136Q96JN2 SNORD116.3-201ENST00000517176 78 ntBASIC2.35□□□□□ -2.03
CCDC136Q96JN2 AL442163.3-201ENST00000554110 156 ntBASIC2.35□□□□□ -2.03
CCDC136Q96JN2 AC006600.1-201ENST00000572529 153 ntBASIC2.35□□□□□ -2.03
CCDC136Q96JN2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC136Q96JN2 AL356292.1-201ENST00000283110 373 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 SNORA63D-201ENST00000364359 132 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 AL079342.1-201ENST00000401460 267 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 RNU6-1186P-201ENST00000410429 97 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 AC007677.1-201ENST00000445757 515 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 RNU6-408P-201ENST00000515910 100 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 AC023157.2-201ENST00000540596 141 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 AC022432.1-201ENST00000595739 310 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 AL133255.1-201ENST00000606374 441 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 AC011476.5-201ENST00000615594 130 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 U6.108-201ENST00000637764 58 ntBASIC2.34□□□□□ -2.03
CCDC136Q96JN2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC136Q96JN2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC136Q96JN2 Y_RNA.5-201ENST00000362334 102 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 RNU6-961P-201ENST00000363893 105 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 RNU6-454P-201ENST00000364292 107 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 SNORD48-201ENST00000364953 64 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 SNORA4.2-201ENST00000365313 147 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 Y_RNA.509-201ENST00000384506 99 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 RPS20P15-201ENST00000412792 311 ntBASIC2.33□□□□□ -2.04
CCDC136Q96JN2 HSPE1P21-201ENST00000438283 308 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms