Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 Y_RNA.101-201ENST00000363154 102 ntBASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-21P-201ENST00000384710 107 ntBASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 MIR1262-201ENST00000408276 93 ntBASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 AL390729.2-201ENST00000416137 156 ntBASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-570P-201ENST00000517051 105 ntBASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 SNORA31.25-201ENST00000517242 134 ntBASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 MIR8062-201ENST00000621515 85 ntBASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK5RAP3Q96JB5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-454P-201ENST00000364292 107 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 Y_RNA.331-201ENST00000365267 102 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-574P-201ENST00000384265 107 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-1235P-201ENST00000384559 107 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 MIR215-201ENST00000384858 110 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 AL355497.1-201ENST00000406262 551 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 MTCO1P44-201ENST00000441935 243 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 RNU6-498P-201ENST00000459468 107 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 MIR4672-201ENST00000583126 81 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 AC022441.3-201ENST00000605737 136 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 MIR6840-201ENST00000611937 71 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 7SK.10-201ENST00000621414 298 ntBASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.59□□□□□ -1.99
CDK5RAP3Q96JB5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 SNORD115-3-201ENST00000363100 82 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.446-201ENST00000384178 104 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 RNU6-463P-201ENST00000384340 107 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 SNORA80E-201ENST00000384744 137 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 SEPT14P8-201ENST00000508026 178 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 RNU2-34P-201ENST00000516534 121 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 MIR4503-201ENST00000582187 83 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 MIR5007-201ENST00000583098 95 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 SNORD113-5-201ENST00000607261 78 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 AC006001.4-201ENST00000622243 395 ntBASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDK5RAP3Q96JB5 MIR340-201ENST00000362125 95 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 RNA5SP289-201ENST00000362332 137 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 snoU2_19.2-201ENST00000363024 80 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.376-201ENST00000365638 108 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.461-201ENST00000384263 103 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 RNU6-102P-201ENST00000384485 104 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 MIR1302-6-201ENST00000408466 90 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 RNU2-54P-201ENST00000410299 190 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 RPL23AP36-201ENST00000413895 458 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 RNU6-221P-201ENST00000459541 99 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 RNU6-155P-201ENST00000516347 100 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 RNU6-966P-201ENST00000516479 104 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 AL161670.1-201ENST00000554348 137 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 AC006380.1-201ENST00000603598 186 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 MIR6852-201ENST00000621699 66 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 MIR6766-201ENST00000622641 72 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 IGHVIII-44-202ENST00000636235 289 ntBASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.57□□□□□ -2
CDK5RAP3Q96JB5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.111-201ENST00000363248 100 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.286-201ENST00000364813 102 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 HMGN2P39-201ENST00000398005 273 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 AL357134.1-201ENST00000445848 426 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 AC245102.2-201ENST00000448956 180 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 AC005042.3-201ENST00000453230 174 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 RPL23AP3-201ENST00000453844 468 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 HMGB3P17-201ENST00000504195 649 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 RNU6-496P-201ENST00000516145 99 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 RNA5SP281-201ENST00000516504 135 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 MIR4529-201ENST00000578110 78 ntBASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CDK5RAP3Q96JB5 AC009487.4-201ENST00000624969 3585 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 MIRLET7G-201ENST00000362280 84 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.84-201ENST00000363011 104 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 SNORA16B-201ENST00000364674 135 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.396-201ENST00000383949 103 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 MIR23A-201ENST00000385245 73 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 Y_RNA.581-201ENST00000391017 97 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 AC096920.1-201ENST00000423991 241 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 AC055731.1-201ENST00000474387 401 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 RNU2-12P-201ENST00000517216 168 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 RNU2-19P-201ENST00000517288 84 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 AC025647.1-201ENST00000517879 253 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 AC087441.2-201ENST00000529141 262 ntBASIC2.55□□□□□ -2
CDK5RAP3Q96JB5 AC007229.1-201ENST00000590455 412 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms