Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU6-295P-201ENST00000516901 104 ntBASIC1.18□□□□□ -2.22
RPUSD4Q96CM3 AC091144.1-201ENST00000519573 138 ntBASIC1.18□□□□□ -2.22
RPUSD4Q96CM3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
RPUSD4Q96CM3 AL137100.2-201ENST00000555786 315 ntBASIC1.18□□□□□ -2.22
RPUSD4Q96CM3 FRG2DP-202ENST00000566967 323 ntBASIC1.18□□□□□ -2.22
RPUSD4Q96CM3 MIR4255-201ENST00000579351 72 ntBASIC1.18□□□□□ -2.22
RPUSD4Q96CM3 AC016727.1-205ENST00000605437 569 ntBASIC1.18□□□□□ -2.22
RPUSD4Q96CM3 AL355073.2-201ENST00000612106 557 ntBASIC1.18□□□□□ -2.22
RPUSD4Q96CM3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.18□□□□□ -2.22
RPUSD4Q96CM3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 RNU6-1266P-201ENST00000362794 105 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 RNA5SP126-201ENST00000365092 109 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 RNU6-331P-201ENST00000384724 107 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 Y_RNA.577-201ENST00000384794 101 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 MIR504-201ENST00000385065 83 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 RNA5SP467-201ENST00000391274 118 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AC007677.1-201ENST00000445757 515 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AC005908.1-201ENST00000468701 347 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AL163195.1-201ENST00000496941 348 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AC010598.1-201ENST00000510378 103 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 RNA5SP61-201ENST00000516453 100 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 RNU1-142P-201ENST00000516682 145 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 APOOP3-201ENST00000536787 586 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AC015688.6-201ENST00000577737 104 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 MIR4513-201ENST00000581077 86 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 BX248123.2-201ENST00000606318 124 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AC005828.6-201ENST00000606610 232 ntBASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
RPUSD4Q96CM3 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 Y_RNA.390-201ENST00000383932 102 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 MIR517C-201ENST00000385103 95 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 AL353997.1-201ENST00000432936 108 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 AC073910.1-201ENST00000445047 438 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 SNORD65B-201ENST00000459126 73 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 RNU1-41P-201ENST00000516161 162 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 RNU1-48P-201ENST00000516400 162 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 MIR5690-201ENST00000583739 73 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 AC113139.1-201ENST00000605049 239 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 AC104260.1-201ENST00000616660 539 ntBASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.16□□□□□ -2.22
RPUSD4Q96CM3 SNORD114-7-201ENST00000362520 77 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 RNU6-318P-201ENST00000384283 103 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 RNU6-310P-201ENST00000384655 107 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 MTCYBP4-201ENST00000401524 249 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 RNU6-370P-201ENST00000411008 104 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 MRPS10P1-201ENST00000448483 130 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 PCNPP5-201ENST00000452246 481 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 SUMO1P2-201ENST00000452524 304 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 RNU7-94P-201ENST00000459576 63 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 FGF7P4-201ENST00000509595 295 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 RPL23AP94-201ENST00000512518 302 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 RNA5SP445-201ENST00000515889 115 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 UBE2V2P2-201ENST00000587677 504 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 AC022217.4-201ENST00000604389 163 ntBASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
RPUSD4Q96CM3 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 RNA5SP361-201ENST00000362686 118 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 SNORA4.2-201ENST00000365313 147 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.361-201ENST00000365515 120 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 RNU6-203P-201ENST00000384038 104 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 RPL21P1-201ENST00000399532 476 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 Y_RNA.646-201ENST00000410980 101 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 MTCO3P19-201ENST00000415864 321 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AC027119.1-201ENST00000440877 241 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 UQCRBP2-201ENST00000447827 297 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 U8.22-201ENST00000459141 133 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 MTND4P17-201ENST00000470444 350 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AC099513.1-201ENST00000490423 301 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 RNU6-902P-201ENST00000517212 91 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AC018448.1-201ENST00000552843 316 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 MIR4709-201ENST00000577272 72 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 SNORD53B-201ENST00000577887 78 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AL390123.1-201ENST00000603216 237 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AL357075.2-201ENST00000614906 189 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AL359757.2-201ENST00000624309 274 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 AC095038.3-201ENST00000634439 195 ntBASIC1.14□□□□□ -2.23
RPUSD4Q96CM3 ICE2P2-201ENST00000483823 2787 ntBASIC1.13□□□□□ -2.23
RPUSD4Q96CM3 RNU6-1301P-201ENST00000362724 104 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms