Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RN7SKP200-201ENST00000410564 320 ntBASIC1.56□□□□□ -2.16
VPS33AQ96AX1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS33AQ96AX1 AC092423.1-201ENST00000430165 186 ntBASIC1.56□□□□□ -2.16
VPS33AQ96AX1 RPL23AP50-201ENST00000434149 455 ntBASIC1.56□□□□□ -2.16
VPS33AQ96AX1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.56□□□□□ -2.16
VPS33AQ96AX1 AL606517.2-201ENST00000442855 241 ntBASIC1.56□□□□□ -2.16
VPS33AQ96AX1 AC099513.1-201ENST00000490423 301 ntBASIC1.56□□□□□ -2.16
VPS33AQ96AX1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS33AQ96AX1 MIR4438-201ENST00000585271 93 ntBASIC1.56□□□□□ -2.16
VPS33AQ96AX1 AL929325.1-201ENST00000603096 117 ntBASIC1.56□□□□□ -2.16
VPS33AQ96AX1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS33AQ96AX1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.56□□□□□ -2.16
VPS33AQ96AX1 MRPL42P3-201ENST00000401492 326 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 MTCYBP4-201ENST00000401524 249 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 ELOCP21-201ENST00000412558 336 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 AC245047.3-201ENST00000429428 127 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 AC005002.2-201ENST00000438228 269 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 PCNPP5-201ENST00000452246 481 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 UBL5P3-201ENST00000475112 231 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS33AQ96AX1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS33AQ96AX1 AL442163.3-201ENST00000554110 156 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS33AQ96AX1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 AL121890.5-201ENST00000620848 304 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 MIR8054-201ENST00000620877 86 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
VPS33AQ96AX1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
VPS33AQ96AX1 RNA5SP361-201ENST00000362686 118 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 SNORD81.2-201ENST00000365153 76 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 Y_RNA.358-201ENST00000365491 99 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 MIR583-201ENST00000384846 75 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 MRPL35P1-201ENST00000404272 572 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 RN7SKP51-201ENST00000410781 304 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 RN7SKP101-201ENST00000411376 320 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 MTCO3P19-201ENST00000415864 321 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS33AQ96AX1 RPS27P22-201ENST00000478056 241 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 SNORA31.10-201ENST00000516482 106 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 AC022868.1-201ENST00000517767 391 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS33AQ96AX1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 AC021506.2-201ENST00000612354 169 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.54□□□□□ -2.16
VPS33AQ96AX1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
VPS33AQ96AX1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VPS33AQ96AX1 SNORD114-1-201ENST00000362705 72 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 MIR513A1-201ENST00000385138 129 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 U8.13-201ENST00000390842 128 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 RNU6-370P-201ENST00000411008 104 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AC006026.1-201ENST00000444025 1803 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AC010469.2-201ENST00000496412 480 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 RNU1-41P-201ENST00000516161 162 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 RNU1-48P-201ENST00000516400 162 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 RNU6-250P-201ENST00000516958 103 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AP003033.1-201ENST00000527244 415 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AC018448.1-201ENST00000552843 316 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS33AQ96AX1 MIR3937-201ENST00000580135 106 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AC073544.1-201ENST00000600110 1595 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AL390123.1-201ENST00000603216 237 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AC080078.3-201ENST00000605407 463 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AC016727.1-205ENST00000605437 569 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AL357075.2-201ENST00000614906 189 ntBASIC1.53□□□□□ -2.16
VPS33AQ96AX1 AC018630.2-201ENST00000534866 2403 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
VPS33AQ96AX1 Y_RNA.577-201ENST00000384794 101 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 SNORA75.6-201ENST00000391318 127 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 RNU4-14P-201ENST00000410858 122 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 RPS27P16-201ENST00000425758 201 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 AC007677.1-201ENST00000445757 515 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 SUMO1P2-201ENST00000452524 304 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 U8.22-201ENST00000459141 133 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 MTND4P17-201ENST00000470444 350 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 PRDX4P1-201ENST00000507189 574 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS33AQ96AX1 AC097462.1-201ENST00000514125 324 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 AC023157.2-201ENST00000540596 141 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 SUB1P3-201ENST00000564581 315 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 MIR5690-201ENST00000583739 73 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 AL162424.1-201ENST00000602325 221 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 MIR6845-201ENST00000613182 61 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 AC040896.1-201ENST00000613819 479 ntBASIC1.52□□□□□ -2.17
VPS33AQ96AX1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS33AQ96AX1 RNU6-1188P-201ENST00000363795 107 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 SNORA20B-201ENST00000384220 132 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 RNU6-318P-201ENST00000384283 103 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 Y_RNA.498-201ENST00000384460 102 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 RNU6-440P-201ENST00000390882 105 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 AC010154.1-201ENST00000425857 269 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 AC098614.3-201ENST00000438957 440 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 RBMX2P4-201ENST00000441256 376 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 PGBD4P5-201ENST00000445958 426 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
VPS33AQ96AX1 SNORA20.3-201ENST00000516880 132 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms